Anser cygnoides domesticus (swan goose): 106043667
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Entry
106043667 CDS
T04896
Symbol
SPG11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
acyg
Anser cygnoides domesticus (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106043667 (SPG11)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106043667 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Kbp-5
Motif
Other DBs
NCBI-GeneID:
106043667
NCBI-ProteinID:
XP_047902152
LinkDB
All DBs
Position
Unknown
AA seq
2426 aa
AA seq
DB search
MAAGGGRELRVLLAPRSGQAWGSPRDAARVRLSRGQNALGALLAPGGIHLEALAPGGGGR
ARGCALPGAWADFMWENTEDYDLQTDKTKILALSKNHELFVYEFTVEDGKYNPISLHSCK
EDTLKKLLEVKNISLSSILSLRILSFKDNRCLLLLNNFIVVHLTFPGEDSSLETCDCITL
DLPPQVLERITDINFCRGILFFLDSSGWIYIFDSFDGANLANIDVALCQGGVQDENRSSA
ITSPLTAVKVSYDLSVAVIINSSNSAISVDLNKYFRQFPGHLICKRDSESLPVKPPEGLD
EDDLASSDYSMELMSSSFRVDRSWKAHLSSLRNTIRKRRPRSPNLAYDTNLPWYQYFTHL
EDHDPLIYETPEKVLAVVPKAVWCIPSKPLQSSGTNLSDSRQHWKQICVEVPQEVVKLEC
KSVTGAKALFVILTNDERLTLALWDFESQDVTYYHFSKDTVYVDCNEDVPLCLLLTEHGL
SLILFGLTQEEFLNRLMIYGSAGVVDSVCHLNGWGRCSIPIHALEAGLENRQLDTVDLFL
KSKESLFNLSAPCSGPEQSTDSASQSFLKNLEELRPALNLLGSAIRENDMEPQSKHFSEQ
LLNLTLTFLSKQLEEIFVHTEEPDEYLQKAADTLTDYVIELRTFMKNYPRTEINIADVGS
DLDEELPAVEESQMWEKLTPEEVIAEAILSNKMPEAQTFFRRHQHPAQSLQEFIQTGLNL
VYDRLLKNNTREATELLRNMGFDVKQQLHKICFYTVDKHVRDLLVKVLQEENYFSEKEKK
MIDFVHQVESFYSESFQDNKEIQSLSSLKNWRKEQDFSRHTAALDLLNCEGHRVHNREVR
VMFNWAQWWDEPIQEMILLPKKACQELSTCNPEVLWMHLTAQHDWLNICSWIEESEPNQT
LCGQANWPTLTADIVDRNMLCSGYMRNDILNKLARNGIFVLSELEDFELLLQRLVYLGGV
LQNPHPVPKYCAASGLDFHARFVLHCLEHNLQYMLYTYLDYYSLTPSNCPILDNKELHEA
HPWFEFLVQCRGVASNPRDPKMIFQASLANAQILIPSNQASVSSMLLEGRTLLALATTMY
APGGIDQVLRNEDMEKPLKKVDPQLLKMALSPYPKLKAALFPPCTSRGILPPDISLYHLV
QTLVPFDPTKLFGWQSTNTLALSDTSSDFPHFSSPELVNKYAIMERLDFLYYLQHGRPAF
AFGTFLVQQLVKSKSPKQLIQQAGNEAYILGLSFFNIPSVGAACVCFLELLGLNSLKLRV
NIKVANMIFSYKTRNEESQHNEIRESLVEKLTKLADGEKAATEEVLISLEEAFWDEMKHQ
GIKKTSSDSRRQWSLVMQFCKLHNTRLSTSYLKECAKSDDWLQFIIQTQLYSYKPDEVIS
ILHGFTPILQDHLMLALEKLPFSCADTGNLENSAASMFKSKHVGSLFQILFRCQENSNPS
RYLLTEGLREHAPILSVLAACFQDANIIHCLCVWIITTVDNVTRSEATNHIQTSVENHIW
DLHDLSLIWKVFLRNQKSKTLIKGFQLFLKDSPLLHILEMYELCMNCKKYNEAKSKLDKF
QEQLTKLKTSDEPAASELPVQWLESQALFLLELMMQQCRTEYELGKLLQLFAATDNLLDG
PYVKKLCALIETLKDSSVSINRSILTSYDTETFQNECRSILEQLQEKGMFSLAREVAELA
ELPVDHVVTQEVLRDLHLLRDIGEWQLKQTRIKFWKKCNDNFMKNSISSKAASDFFLNQA
NTVFESSVHEKINSIMERHLLLTLAGHWLAKNDSVSLDKLEEIEKQIWICRITQQTLSAG
EGSGKSRLSFHGMVNMDLTFDNLAKEFSFSKLPALNTPNYLKPEGLEFRESEQTLTNDEK
ESLKFLIGCLLDEGSVHEASRVCRYFHVYDRDVSLVLHCRALASGETGLDKLHADIQTLL
VAIEKMYENSASQQTRIPSTSSLEDWTHIVAPDDQVVVSLKALIDECVHGRNYCRQVLCL
YELSKELNCSYSEMSAHDPEEVLRAILSSHQPDRCRKAQAFITTQGLQPEIVAELVAEEI
TKELLASSEGKGQKQVLNPAAESQAFLQLAKLCQDHTLVGMKLLDKISSVPRGELSCITE
LLILAHNCFSLTCHMEGITRVLQAARLLTDEHLAPNDEYGLVVRLLTGIGRYNEMTYIFE
LLHEKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHEA
AAGIQLKLIESQPWEESLQDVANLKKLLMKALTLFIDAAESYSKDSCVRQSLRCSRLTKL
ITLQLHFLNTGQSTMLINLNRQNLMECIMSLPRFYQAAIVAEAYEFVPDWAEVLYQQVIT
KGDFNYLEEFKQQKLLKPSIFEEIAKKVKQHPPADAALKNLKKLLAYCEEIYMQYRLAYD
NKFYDVVNMLLKDAQTGCCLNDMLSN
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcggcgggcgggagctgcgggtgttgctggcgccccgctcggggcaggcg
tggggctccccgcgggacgcggcccgggtgcggctgagcaggggccagaacgccctgggc
gccctcctggcccccggcggcatccacctggaggccctggcgccgggcgggggcggccgg
gcccggggctgcgccctcccgggagcctgggctgacttcatgtgggagaatacagaagat
tatgatctacaaacagacaagacaaaaatactggctcttagtaaaaatcacgaactgttt
gtctatgaattcactgtagaagatggaaaatataacccgatttccctgcacagttgtaag
gaagatacgcttaaaaagctcctcgaagttaaaaatattagtctttcttcaatattgtct
ttgaggatactgtcttttaaagacaacagatgcctacttctgctcaataactttattgtt
gtgcatcttacctttcctggagaagattcatcattagagacatgtgactgcattaccctt
gatttgccaccacaagttttggaaagaataacagatataaacttctgcaggggaattctg
ttttttttagacagttctggctggatttacatatttgattcttttgatggtgcaaatcta
gcaaacattgacgtagcactctgccagggaggtgtgcaggatgagaacaggagttcagcc
atcacatcgccactcactgcagtgaaagtgtcatatgatctcagtgttgctgtgatcatc
aattcttccaacagtgccatttcagtggatctaaacaagtacttcagacagttccctggg
catttgatctgtaaaagagattctgaaagtcttccagtgaagccacctgaaggtcttgat
gaggatgaccttgctagttctgactacagtatggagcttatgtcatcgtctttccgtgtg
gacaggtcctggaaggcacacttatcctcactacgcaatacaatcaggaaaagaagacca
cgttctccaaatttggcgtatgacacgaatttaccgtggtatcagtattttacccatctt
gaagatcatgatcccttaatctatgaaactcctgagaaggtgctggctgttgttccaaag
gctgtttggtgcatcccttccaaacccttacaaagcagtggtacaaatctcagtgattca
aggcagcactggaaacaaatctgtgtagaagtaccacaagaagtggtgaaactggagtgt
aaatctgtaactggagctaaagcactgtttgtaatattaacaaatgatgaaagattgact
cttgctctctgggatttcgagtcacaagatgtgacttattaccacttcagcaaagatact
gtttatgtggattgtaacgaagacgtgccgttatgtctacttctgacagagcatggtctt
tccttaattctgtttggtttaactcaagaagagtttttgaatagattgatgatctatggc
agtgctggagtcgtagattctgtttgtcatctcaatggatggggacgatgttcaattcca
atacatgcgctagaggctggtttggaaaatcgtcaactagacacagtagacttgttttta
aaaagcaaagaaagtctttttaatctttctgcaccctgctctggacctgaacagtctact
gatagtgcgtctcagtcttttctgaaaaatttggaagagctgaggccagctttaaactta
cttggctcagcaatcagagaaaatgatatggagcctcagagtaaacacttttctgagcag
ctgctaaacctcacgttgactttccttagcaagcaacttgaagaaatttttgtccacaca
gaggaacctgatgaatacttgcagaaggctgcagatactttaactgattacgttattgaa
cttaggacatttatgaaaaattaccctcggacagaaataaacattgcagatgtaggaagt
gatcttgatgaagagctgcctgcagtagaagaaagccaaatgtgggaaaaactgacacca
gaggaagtcattgctgaggccatcttaagcaacaaaatgccagaggcccagactttcttc
cgaaggcatcagcatcctgctcaaagtcttcaggaatttattcagacgggtttgaatctg
gtctatgaccgtcttctgaagaacaataccagagaggccacggaacttttaagaaatatg
ggctttgatgtgaagcagcaattgcataagatatgtttctacacagttgataaacatgta
cgagatttgttggtgaaagttttacaagaagaaaattatttttctgaaaaagagaagaaa
atgatagactttgtgcatcaggttgaaagcttttactcggagtccttccaagacaataaa
gagattcagtctctttccagtttaaagaattggaggaaggagcaagacttttccagacat
acagccgctctagacttgttgaattgtgaaggacatcgggttcacaatagggaagtcaga
gtgatgtttaactgggctcagtggtgggatgagcccattcaggaaatgattcttctacct
aaaaaagcatgccaagaactttccacctgtaatcctgaggttctttggatgcacttgaca
gcccagcatgactggcttaatatttgttcatggattgaagaatctgagcccaaccagacg
ttgtgtggacaggctaactggcccactctgactgcagacattgttgaccgaaatatgttg
tgtagtggctacatgagaaatgatatattaaacaagctggctagaaatggcatttttgtc
ctttctgagttggaagattttgagcttctgctccaaagactggtttacctagggggcgta
ctgcaaaatcctcaccctgttccgaaatactgtgctgcaagtggtttggacttccacgct
cgttttgtccttcactgtttagaacataatttgcagtatatgttgtacacttacctagat
tactacagtttgaccccttcaaattgccctattttggataacaaggaattgcatgaagca
catccctggtttgaatttctcgtgcagtgtcgaggggttgccagtaacccacgagatcca
aagatgatttttcaagctagtcttgcaaatgctcagatcttgattcctagtaatcaggcc
agtgtgagcagcatgctactggaaggacgtacactattagcacttgctaccacaatgtat
gcacccggaggtattgatcaggttcttcggaatgaagatatggaaaaacctctaaagaaa
gttgatccacagctcttaaaaatggcattgagtccttaccccaagctcaaagctgctctc
tttcccccatgtacttctcgtggaattttgccacctgacatctctctttaccatcttgtt
cagacattagtgccttttgatccaactaaattatttggctggcagtcaacaaatactctt
gctctatcagatacatcaagtgactttcctcatttttcatcccctgaactggtgaacaaa
tatgccataatggaacgactggattttttgtactatttgcagcacggacgtccagcattt
gcttttggtacatttttggtccagcagttagtaaaaagcaaatctcccaaacagctgatt
cagcaagcaggaaatgaagcctatattttaggcctttctttcttcaacataccttcagta
ggagcagcctgtgtttgttttctggaactgcttggtctcaacagcctgaaactgagagtc
aacattaaagttgcaaacatgatattcagttacaaaaccagaaatgaagaatctcagcac
aacgaaataagagaatctttggttgaaaagttaacaaagttggctgatggtgaaaaagca
gcaacagaggaagttcttatctccttagaagaagccttttgggatgaaatgaaacatcaa
ggaataaagaagacgtctagtgactctagaaggcagtggtctttggtaatgcagttctgc
aaactccataacacgaggctgagtacatcgtacctaaaggaatgtgctaaatctgacgac
tggctgcagttcatcatccaaacccagctgtacagctacaagccagatgaggtcatttct
atccttcacggattcactcccattttacaagatcacttgatgttggcattggagaagtta
ccgttttcatgtgctgatacagggaatcttgaaaacagtgctgccagtatgttcaagagc
aaacatgtgggtagtctctttcaaatcctttttcgatgtcaagagaactccaacccttca
cgttaccttttgactgaaggattgagagagcatgctcccattctgagtgttttagcagca
tgtttccaagacgccaacattattcattgtctttgtgtctggataattactactgtggat
aatgttaccagatctgaagcaacaaaccatattcagacatcagtagaaaatcacatatgg
gatctccatgacctatcacttatctggaaagtgtttttaaggaatcaaaaaagtaaaaca
cttataaagggcttccagctatttttaaaggattcccctttactgcatatactggagatg
tatgaactgtgtatgaactgtaaaaaatacaatgaagctaaaagcaaacttgacaagttt
caggaacagctcacaaaacttaaaacttcagacgaaccagcagcttcagaattacctgtg
caatggctggaatcacaagcattgtttcttcttgaattgatgatgcagcaatgtagaaca
gaatatgaattaggaaagctcttacagctgtttgctgcaacagataatctactcgatggc
ccttatgtgaagaaactctgcgcactcattgaaaccctgaaggattcctccgtatcaatt
aatcgctccatcctaaccagttacgatacagagacatttcagaatgagtgcagatcaatt
ttggagcagctacaagagaaaggaatgttctcactggctcgggaggtagcagaattagct
gaattgcctgtggatcatgtagttacccaagaggttctaagagatctacatcttttaaga
gacattggagagtggcaactaaaacagacaagaattaaattctggaaaaaatgtaatgac
aacttcatgaaaaattcaatctccagcaaagctgcatcagatttttttttgaatcaggca
aacacagtgtttgaatcatcagttcatgagaagataaatagcattatggagagacatctg
ttgcttaccttagctggccattggctagccaagaatgactcagtgtcactggacaaattg
gaagaaatagagaagcagatctggatttgtcgcatcacacaacaaacattatccgcaggt
gaagggtcaggcaagtcaagactttccttccatggcatggtgaacatggatcttaccttt
gataacttagctaaggagttttctttttcaaagctacctgctctgaacacaccaaactac
ttaaaaccagagggtcttgaattcagagagtctgaacagaccttgactaatgatgagaaa
gaatcactcaagtttttgattggatgccttcttgatgaaggaagtgtacatgaagccagc
cgtgtttgtcgatatttccatgtctacgacagagatgtttcactggtattgcattgcaga
gctctggcctcaggggagactggtctagacaaattacacgcagatattcagacgctcctt
gtagcaatagagaagatgtatgaaaacagtgcatcgcagcaaaccagaatcccaagcaca
tcaagcttagaagactggacacacattgttgctccagatgatcaggttgttgtcagtctg
aaggctctcatagatgaatgtgttcatgggagaaactactgcagacaggttctctgctta
tatgaactttctaaggaattgaactgctcctacagtgaaatgtcagcccatgaccctgaa
gaagtgcttcgagcaattctgtcatcccaccagccggacagatgcaggaaagctcaggca
ttcatcaccacgcagggtctccagcctgaaattgtggcggagttagtggctgaagaaatc
acaaaagaattactggcatcttcagaaggcaaagggcagaaacaagttttgaaccccgca
gctgagagtcaggcattcctacagcttgctaagctctgccaggatcacacgctggttggc
atgaagttactggataaaatttcctctgtacctcgtggggaactgtcatgcattacagaa
ttgctgattttggcccataattgctttagtttgacttgccacatggaaggaatcactaga
gtcctccaagcagcacggcttcttacagatgaacatttagcccctaatgatgagtatgga
cttgtggttcgtcttcttactggaattggcagatacaatgaaatgacctacatatttgaa
ctgctgcatgagaaacattactttgaagtgctcatgagaaagaaattagacccaagtggg
acactgaagacagctctgctggattacatcaagcgttgccgcccaggggacagtgaaaag
cacaacatgatcgccctttgcttcagtatgtgtcgagaaattggagagaatcatgaggct
gctgctggcatacagcttaaactcattgaatcacagccatgggaggagtctcttcaagat
gttgcaaatttaaagaaactgctgatgaaagctctgactctctttattgatgcagcagaa
agttactctaaggactcctgtgtccgacagtccttgcgctgcagtcggctaacaaagctg
ataaccctccagctgcattttctgaacaccggtcagagcactatgctgattaacctgaac
aggcagaacctgatggaatgcatcatgtccttgcctagattctatcaagcagctattgtg
gctgaggcttacgagtttgttccagactgggctgaagttctgtatcaacaagtgatcacc
aagggagacttcaattacttagaagaatttaaacagcaaaaactactgaagcctagcata
tttgaggagattgctaagaaggttaaacaacacccacctgctgatgctgctctgaaaaat
ctgaagaaattgcttgcttactgtgaagagatctacatgcagtacagactggcttatgat
aacaagttctatgatgtggtaaacatgctcctgaaagatgcacagactggatgttgtctt
aacgacatgctatcaaactag
DBGET
integrated database retrieval system