Acidithiobacillus caldus ATCC 51756: Acaty_c0704
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Entry
Acaty_c0704 CDS
T03561
Name
(GenBank) 3'-to-5' oligoribonuclease (orn)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
acz
Acidithiobacillus caldus ATCC 51756
Brite
KEGG Orthology (KO) [BR:
acz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acz03019
]
Acaty_c0704
03009 Ribosome biogenesis [BR:
acz03009
]
Acaty_c0704
Messenger RNA biogenesis [BR:
acz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Acaty_c0704
Ribosome biogenesis [BR:
acz03009
]
Eukaryotic type
Pre-60S particles
RNases
Acaty_c0704
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AIA54583
UniProt:
A0A059ZSV4
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All DBs
Position
complement(698322..698924)
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AA seq
200 aa
AA seq
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MDPKTQRLVWIDLEMTGLNPERDQILEIASIVTDNELRVLSEGPVLAVHQSEAVLAAMDD
WNQRTHGNSGLVQRVRESRLDLGAVEAQTLDFLQAHVQPGTAPLCGNSVCQDRRFLARLM
PRLERFLHYRLIDVSTIKELAYRWYPSLPRYPKTERHEALADIRESIGELQYYRERLFPE
RPFVARTMGGFGEADDAELP
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaaaacacagcgcctggtctggatcgatctcgagatgacgggtctgaacccg
gagcgggaccagatactagagattgccagcatcgtcaccgacaatgagcttcgggttctt
agcgaagggccggttctggcggtccatcagagcgaggcggtgctcgccgccatggacgac
tggaatcagcgtacccacgggaactccggcctcgttcagcgggtgcgtgaaagtcgcctc
gacctcggcgccgtggaggcccagaccctggacttcctgcaagcccacgttcagccgggt
acggcgccgctgtgcggcaatagcgtctgtcaggatcggcgtttcctagctcgcctcatg
cctcgtctcgagcgctttctccactaccgcctcatcgacgtcagtaccatcaaggagcta
gcctaccgctggtatcccagcctaccacgctatcccaagaccgagcgtcacgaggccctg
gccgatatccgcgaatccatcggcgaactgcagtactaccgcgagcggctgtttccggaa
cgccccttcgtggccagaacgatgggaggttttggggaggcggacgacgccgaactgcct
tga
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