Acropora digitifera (stony coral): 107341930
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Entry
107341930 CDS
T04352
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
adf04054
]
107341930
Pattern recognition receptors [BR:
adf04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
107341930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
ResIII
Helicase_C
DEAD
RIG-I_C
Motif
Other DBs
NCBI-GeneID:
107341930
NCBI-ProteinID:
XP_015762881
LinkDB
All DBs
Position
Un
AA seq
778 aa
AA seq
DB search
MMILKSHLLEGLVPEAGHNVTMKINIMKEEYETACDILAEKLEGVSTDENQKVKKYRIPP
VFLGKKAEFKPRNYQVELARPAKAGNNTVICAPTNSGKTYVAIAITKTYLTKPPDGKDDK
GMTATSALVHPRKPVLFIVNKVNLVLQQRQRFDYYLSDRYDITDISGANAQDKTLDEIIR
ENDIIVLTAQILVDALKSKRVKITDFSLLIFDECHHTNNKHPYNEIMLAYLAIKFPVDGN
RAQAAKKENLPQIIGLTASLGVGKARNNADAQNHILQLCANLDCSILSTVQQHIKELEEM
TGTCERACLEVFDGNKDYFDNIIEAVMIRIERMIAQSSPPTMCRSSQQYQQWLKIMESTT
LRNREQFTLIQHLLIYHTALAIKKSCRVADALKYMQSFHQKQRQDKFTDIDHTLRQVYTA
TKKDLNEMNQKHGEIKNPKLEAVADLLKQKYDACVEKGGQKTAKGMLFTKTRENTKALKA
WLDENPDLSFIKAERLVGTGKGEDGMTQRQQEEVISNFRIGNINLLVATSVAEEGIDIPD
CKFVIRYDVCGNEIGGVQSRGRVRDKEGKYEVVAGKESGVIEKENLNLLREEMMQDAIKE
VKGMDEDLYKEKVLQLQMRAVQQRQNEESSRRSAKDKQQKSKVKLFCKKCSEFACSGDYI
RCIKEAHHVVIDKAFLSKFSFKRNKCPQSINGVELTGPIHCQACDKEWGVMLRYQSLEKP
CIKASSFAFEIEDETGGKSTSCPKKWKDTKFHVQAFDLYKDQAQECISWMDLSELSLD
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgatgattttgaagtcgcatttgttggaagggctggttccagaagctggacacaatgtc
accatgaaaattaacatcatgaaagaagagtacgagacagcatgtgatatcttagctgaa
aaactcgaaggtgtctcaacagacgaaaatcagaaagtcaagaaatatcggattccacca
gtatttctgggaaaaaaggcagaattcaaacctcgaaattatcaagtggagcttgcccgc
cctgccaaagctggaaacaacacggttatttgtgcaccaacgaacagtggaaagacttat
gtggcgattgcaataaccaaaacgtacttgactaagccgcccgatggcaaggacgataag
ggaatgactgctacatctgctcttgtgcatcctcgcaaaccagtgttgtttattgtcaac
aaagttaatttagttttgcagcagagacaacgctttgattactatttatctgatagatac
gatataaccgatatatcaggagccaatgcgcaagacaaaacactggatgagatcattaga
gagaacgatataattgttctaactgcgcagatcctggtggacgcgttgaagtcaaaacgt
gtcaagattacagacttctctcttctaatatttgacgaatgtcatcacaccaacaataaa
catccatacaacgaaatcatgcttgcctacctggcgataaagtttcctgttgacggtaat
cgagcacaggccgcgaaaaaagaaaatcttccacagatcattggtttaactgcttcattg
ggagttgggaaagctcggaacaatgctgatgcgcagaatcacatccttcagctgtgtgca
aaccttgactgctctatcctttcgacagtgcagcaacacatcaaggaattagaagagatg
actgggacgtgtgagcgggcttgcctggaagtgttcgatggaaacaaagattactttgac
aacataatcgaggccgttatgatcagaattgagcggatgatagcgcaaagtagtccacca
acaatgtgccgaagcagtcagcagtaccagcaatggctgaagatcatggaaagcaccaca
ctgagaaatagagagcagttcactttgattcaacatttgttgatatatcacactgcttta
gccatcaaaaaaagttgccgagttgcagacgctttgaaatacatgcaaagttttcaccaa
aagcagagacaagacaagttcaccgatattgatcacacattacgacaagtttacaccgcg
accaagaaggacttaaacgaaatgaaccaaaaacacggtgaaataaagaatcctaaacta
gaggccgttgctgacttgctgaagcaaaaatacgacgcctgcgtggaaaaaggcggtcaa
aagacagctaaaggaatgctgtttactaaaacacgtgagaacaccaaggcgctgaaagca
tggttggatgaaaatccagatctgtctttcataaaggcagagagacttgttggtactggc
aaaggggaagatggaatgacacagcgtcagcaggaagaagtaatttcaaatttccgcata
ggcaacataaacttgttagtggctacttcagtcgcggaagagggtatagacattcctgac
tgtaaatttgtcatcagatatgacgtatgcggtaatgaaattggtggcgtgcagtcccgc
gggcgtgtgcgagacaaagaaggaaaatacgaggtggtggctgggaaagaaagcggagtc
atcgaaaaagagaatttaaatttactcagagaggaaatgatgcaagatgccattaaagag
gtcaaaggaatggatgaggatttgtacaaagagaaggttttacagcttcagatgcgagca
gtacaacaacgacaaaatgaagagagcagtaggcgatcagcaaaagacaagcaacagaag
agtaaagtcaaactgttttgtaagaagtgcagtgagtttgcatgcagcggagactatatc
cgatgcataaaggaagcccatcacgtggtcatcgataaagctttcctctcgaaattttct
ttcaagaggaacaagtgtccccaaagcatcaatggagttgagctcacagggccaatacac
tgtcaagcttgtgataaagaatggggtgttatgttgaggtaccaatcacttgagaaacct
tgcattaaagcttcctcttttgcctttgaaattgaagacgagactggtggaaagagtaca
tcttgtcctaaaaagtggaaagatacaaaatttcacgttcaagcctttgatctttacaag
gaccaagctcaagaatgtatatcctggatggacttatctgagctttccctagattaa
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