Acropora digitifera (stony coral): 107347965
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Entry
107347965 CDS
T04352
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03013
Nucleocytoplasmic transport
adf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107347965
03015 mRNA surveillance pathway
107347965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107347965
03041 Spliceosome [BR:
adf03041
]
107347965
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107347965
Spliceosome [BR:
adf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
107347965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lipase_GDSL_2
PWI
Lipase_GDSL
DUF993
Motif
Other DBs
NCBI-GeneID:
107347965
NCBI-ProteinID:
XP_015769451
LinkDB
All DBs
Position
Un
AA seq
1231 aa
AA seq
DB search
MQINITGFLQSKNAREFMKELWTLLVSAQENIGGIPSSLLEKKKEEIKQRKLEQERIQAN
LQKYHGDQQQTEPDSTATDDNVASESASAPGSHDISEEIRKAKEVAQSLAGKESSPKRGV
KKSNKTSGHSDSNDSDDAGNSREKRDKGKSEEVTESPSLERMKKEKGQQEGSRSKFLQPK
WRSRLLSSAAKPASRDKQGWDTEHTKYVAQARSPGVDVLLTGDSIVKGLSRYPRVWRKYF
MPLKSLNFGVGGDRTQHVLWRLQNGEMECDVKVVVVLCGTNNIEKNSPSEIVQGILAIVD
YIRMKKPAVSIIVCGILPRDLFPTARREDIEEVNDELFEYISYSEELADKNVIFLAPGKG
WTTKGGQLDESLYFTDHLHLVEEGDEKLAKSISRLVKDLLKADEDKDDSLSQKRLIKQKE
IEETETTKKESASEKEVKKERSSSRSRSRSRSVERDSKRPRDKRGRRRSRSKSSVSRSRS
RSFSSSRSRSRERRRRSRSPRRVSSYNRNRWSPYRRRRTPSPRRWTPPRRRSPPRRRSLS
PRRKPRRSPSPRRSPSPRRRSRSVSASSRSRSRSRSASFSSRSSHSRLGSVEKEKKNKEK
DKDKDVKKEKEDVKEAEKETTVSQEKGKEADLSPAPPPTHHRSTYKKQEQQQSPVKQPSP
SSSSSSPSPTPPPEKQEKEEKERSPPVPKSKKTTSRRYRKHSPSPSSEEEEWSPERRRTD
ASKDRKKEKERSDSPHERRRKRRDSSPSPRGKRRNSSSSPRRKRREVSRSPSPRRKRREH
SRSPSPIRRRYQEARSPPRRRRKSDYSPSPPPKERRRLPDPSPPRNRERRKERRSPSPPP
RRRQRSSSSPPAIRRVESSPPSGRRRRPVDRSRSEDKASRERRRSPEPDKEVGRRRKVSE
RSRSQSSSVSPEPPKKPQEDSTTLKKSKSRQVSRPSSSSASPEPTSAKKRSRETQESPRR
SPPKEVLTDKGEGKRRSQSAASPAVDSRDRRREERKSASRSPEGRRNRRSAQVSSASPAV
KAKSRSKRSASGSPPPPPKAPRSRGSKRSPLSSPEGDNKSRSRASKQSPSPLPDTRQQSR
AVKESPSESPHERSKRKAAVKRSSSEDKSTEPPPRKARRSEEEEAPEKSPIPSPQTKESS
NEEQEKTEEKEPKGEKKKKHKKHKKHGGSKHKHKRSKHKKRKDKDKSPAQSETMDEDDTG
ETLEKKLREKALQSMQRHNKSPDAQPEPVDD
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgcagataaatataactggatttcttcaaagtaagaatgcgagagagtttatgaaagag
ttgtggaccttgcttgtaagtgctcaagaaaacattggaggcattccttcttcattgtta
gaaaagaagaaagaagaaatcaagcaacgaaagctggagcaagaacgtattcaagctaac
cttcagaaataccatggagatcaacaacaaactgaaccagacagcacagccactgatgac
aatgttgcaagtgaaagtgcatctgctcctggatcacatgacatctctgaagaaattaga
aaggctaaggaagtggctcagtctctagctgggaaagaaagttctcccaaaagaggtgtc
aagaagtctaataaaacctctggccactcagacagcaatgatagtgatgatgcaggaaat
tctagggagaagagagataaaggcaaaagtgaagaagtaactgaatctccttctttggaa
agaatgaagaaagagaaaggccagcaagaaggatccagaagcaagttcctgcagccaaag
tggaggtcacgcctgttgtcatcagctgcaaagccagccagcagagataaacaaggatgg
gatactgaacatacaaaatatgtggcacaggcaagaagtccaggtgtagatgttctgtta
actggtgattcaatcgtcaaaggcctcagtcgttatccgagagtttggaggaagtacttc
atgcccctgaagtctttgaactttggcgtaggcggtgacagaactcagcatgttctttgg
cgacttcaaaatggcgaaatggaatgtgacgtaaaggttgtcgtggtgctttgtggtacg
aataatattgaaaaaaatagccctagtgaaattgttcagggaatactagctatcgttgat
tacattcgaatgaaaaagccagctgtaagtattattgtctgtggcattctcccgagagat
ttattccccactgcacgacgagaagacattgaagaagtcaatgatgaactctttgaatac
ataagctattctgaagagctggctgataagaatgtgattttcttggcacctggaaaaggt
tggactaccaagggagggcaactagacgagtcactgtacttcacagaccacctgcatctc
gtagaggaaggagatgaaaagcttgccaaatcaatttctcgtttagttaaggaccttctc
aaagcagatgaagacaaagacgactctttgtctcaaaagagacttatcaagcaaaaggag
attgaagaaactgagacaacaaaaaaagaatctgccagcgaaaaggaagtcaagaaagaa
cgttccagctctcgttcaaggtcaaggtctcgctcagttgagagagattcaaagcgacca
cgtgataagagagggcgcaggcgtagcaggtccaagtcctctgtttcacgttcacgatcc
cgatcgttctcatcgtcaagatcccgcagtcgagaaagacgaaggcggtctcgctcgccc
cgtcgagtgtcgtcgtacaatagaaaccgttggtcgccatacagacgccgtaggactcca
tccccgagaagatggactccgcccagacgaaggtcacccccgagacgaagatctctctcc
ccgcgccgcaagccgcgccgttcaccatctcctcggcgttcaccatcacctcgccggcgg
tcacgctcggtgtcagcatcgtcacgttcacggtcacggtcacgttctgctagctttagt
tcccgttcatcacactctcgattgggttccgtcgaaaaggagaagaaaaacaaagaaaag
gacaaggacaaagacgtcaagaaagagaaagaggatgtaaaagaggcggaaaaagaaaca
actgtaagtcaagagaaaggtaaagaagcggacttgtccccagcccctcctccgacacac
catcgttcaacttacaagaagcaagagcaacaacagtcgccagtcaagcagccttcaccg
tcgtcctcttcctcatctccttcacctactccacccccagagaaacaagaaaaggaggaa
aaagagaggtcgccacctgtccccaaatcaaagaagacaacaagtcgccgctacaggaaa
cattccccttcgccatcatctgaagaagaggaatggtcacccgaaagaaggagaactgat
gcctccaaagatcgcaagaaagaaaaggaaagaagtgattccccccatgagaggagacga
aaacggagggattcttctccgtcccctcggggaaagcgccgtaattcgtcttcctcgcct
agaaggaagagaagggaagtctcgcgttccccttctccgaggcgaaaacgaagggagcat
tctcggtcgccatcacctattcgaagacgctatcaagaagcgcgctcccctcccaggagg
agacgaaaatcagattattccccatcacctcctcccaaggaaaggcgccgactcccggac
ccctcccctcctcgcaacagagagcggcgaaaggaaagaagatccccatctcccccacca
cgcaggcgccagcgatccagctcctcgcctccagctattcgtcgggtagagtcgtcacct
ccttcgggacgtcgtcgtcgtcctgtcgaccggtctcggtcggaggataaagcatcaaga
gagcgacgtcgatcgccggagcccgacaaggaagtaggaaggaggcggaaggtgtctgaa
cggtcacgatctcagtcatcttctgtctcccctgagcctccgaagaaaccccaagaagac
tccacgactttaaagaagagtaaatcacgtcaagtcagtcgtccctcgtcctcttccgct
tcccctgaaccaacatccgccaagaagagatcgcgcgagactcaggaatctcctcgaagg
agtcctcccaaggaggttttgacggacaaaggggaaggaaagaggcgatcacagtcggcg
gcttcgcccgcggtcgattcacgggatcgcagacgggaagaacgtaaatcagcgtccagg
tcaccagagggacgtagaaaccgaagatcagctcaagtttcatcggcttctcccgccgtc
aaagcgaagtctcgcagcaaacgatcggcttcaggttcgccaccaccgcctcccaaagcg
ccgaggtcacgaggatcaaaacggtcaccactttcatcccctgaaggtgacaacaaatcc
aggtcccgcgctagcaaacagtcaccgtctcctttaccagacactcgccagcagtcacgc
gcggttaaggagagtccctctgaaagtcctcatgaacgatctaagcgtaaggccgcggtt
aagaggtcttccagtgaagataaatcgacagagcccccgccaaggaaggcccgtcgaagc
gaagaagaggaagcacctgagaaatctccaatcccgtcccctcaaactaaggaaagctcc
aacgaggaacaagaaaagacagaagagaaagaacccaagggagaaaagaagaagaaacat
aagaaacacaagaaacatggtggatccaaacacaaacacaagcgttcaaaacacaaaaag
cgtaaggacaaagacaaatcaccagcgcaatctgaaactatggatgaggacgacacaggg
gaaaccttggagaaaaagctccgagaaaaagccttgcaatctatgcagagacataacaaa
tcaccggatgcgcaacctgagccagttgacgactga
DBGET
integrated database retrieval system
