Aeromonas dhakensis: CK627_06975
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Entry
CK627_06975 CDS
T05186
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
adh
Aeromonas dhakensis
Pathway
adh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK627_06975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adh03019
]
CK627_06975
Enzymes [BR:
adh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK627_06975
Messenger RNA biogenesis [BR:
adh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK627_06975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASX10543
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All DBs
Position
1419034..1420254
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AA seq
406 aa
AA seq
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MTFDQLALAPALLAALPTNLQHPTRVQQLAIPAALAGRDLLALARTGSGKTLAFGLPLLQ
RLDPALAEVQGLVLVPTRELAVQVSEALQGPAAGLGLRLVTLCGGVEQAQQQAELALGPQ
LLVATPGRLRDLLGQQLLTLAGLRTLVLDEADRLLEMGFWPDIQWLMKAMPDARQQMLFS
ATLPAELEALATGLLKEPARVEADPRNSVADDIEERLYLVNKSSKVPALISLLKAHEWPQ
VLVFISARDDADGVARKLAKAGIAVAALHGEKEQAVREQALGDFKAGKVRVLVATDLMAR
GIHVEALPLVINLDLPASAPVYVHRIGRTARAGRSGLAISLTCHGEADTLAAIRTLTGRE
LPLASLTGFPVTDKPASGEGKRAPRDKQANRRTQAKRSVKQFKGKA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgaccaactcgcccttgcccccgccctgctggcggccctgccaaccaatctt
cagcacccgacccgggtacagcaactggccatcccagccgcgctggcgggacgggatctg
ctggcgctggcccgcaccggcagcggcaagaccctggcgttcggcctgccgctgctgcag
cggctggatcccgccctggcagaggtgcaggggctggtgctggtgccgactcgcgagctg
gcggtgcaggtgagcgaggcgttgcaggggccggccgccgggctgggtctgcggttggtg
accctgtgcggcggggtggaacaggcgcagcaacaggccgagctggcgctggggccgcag
ctgctggtggcgaccccggggcggctgcgggatctgttgggccagcagctgctgaccctg
gccggcctgcgcaccctggtgctggacgaggcggaccgcctgctggagatggggttctgg
cccgatattcagtggctgatgaaggcgatgccggacgcgcggcagcagatgctcttctcc
gccaccctgcccgccgaactggaggcgctggcaaccggtctgttgaaagagcccgcgcgg
gtggaggcggatcctcgcaacagcgtggctgacgacatcgaggagcggctctatctggtc
aacaagagcagcaaggtaccggcgctcatcagcctgctcaaggcccacgagtggccgcag
gtgctggtcttcatcagcgcgcgggacgacgccgacggggtggcccgcaagctggccaag
gcgggcatcgcggtggcggccctgcacggtgagaaggagcaggcggtgcgtgagcaggcg
cttggcgacttcaaggcgggcaaggtgcgggtgctggtggccaccgatctgatggcgcgc
ggcattcacgtggaggcgctgccgctggtgatcaacctggacttgcccgccagcgccccc
gtctacgtgcatcgcatcggccgcaccgcccgggcagggcgcagcgggctcgccatctcg
ctcacctgccatggcgaggccgacaccttggcggcgatccgcaccctcaccgggcgtgag
ctgccgctggcttcgctcaccggcttcccggtgaccgacaagccagccagcggggagggc
aaacgcgccccccgcgacaaacaggccaaccgtcgcacccaggccaagcgcagcgtcaag
cagttcaagggcaaggcgtag
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