Auricularia subglabra: AURDEDRAFT_116208
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Entry
AURDEDRAFT_116208 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_116208
04131 Membrane trafficking [BR:
adl04131
]
AURDEDRAFT_116208
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
AURDEDRAFT_116208
Membrane trafficking [BR:
adl04131
]
SNARE
SNARE associated proteins
Others
AURDEDRAFT_116208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
tRNA_lig_CPD
Motif
Other DBs
NCBI-ProteinID:
EJD39275
JGI:
116208
LinkDB
All DBs
AA seq
656 aa
AA seq
DB search
MSTQQLAPSSPNPARASSPGPAVPSNGKQQQQQAARASLAGVRGSPAPHSPIPSPRPTGM
IGMGRPSSELLQGGAAAFQTPEESAIDQWFENLQHYEATLEEMAAASLDVNFKEELSAIE
QWFRVLSEAERTAALYSLLQHSTQVQIRFFVTVLQHMARADPMTALLSPAFGGSMQDQMD
AKLKSMGLKSPALKTPASPNPRSFSSQQQRASMDASTFLSAENAPTSPIGPIGGDAAAAA
TLAQQRAKLKANRISAPVMLNNGSGERSASWGSPLGQVAERGPSPVPSDGGVSNRDGSTS
PAPPGSNSSARPKSTDFTGVASSFSKSRLDVPLEDQLSPMIGGNWASMSNTPIVPIFGPK
SDQVHAASLDAATAKLHNLSLSNTNPSSRVVLDDARKFRRNSRTNEPEGEVQVTGRRNVS
GSGLGGPGWANNLGGGSSGLGVGGLRSPALSNAGSNRFGGSDHGDLQAAQQALAFANMNM
SGMGSPALAAAAAMNPMMAAQLAAGGFNPLLANQMNMGMMNPAIAAQFGTSPEAIFAAQM
GWNAAASQLGMGGGGRGGRVAGGMVRKGPGSAAGGSTRGATEKKDEDEVDPALLNDIPAW
LRSLRLHKYTPNFEGMNWRDMVVLDEAALEAKGVAALGARRKMLKTFENVRAKMGV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccagcaactcgccccgtcctcgcccaacccggctcgcgcgtctagcccgggc
cccgcggtgccctccaacggcaagcagcagcagcagcaggccgcacgtgcctccctggcc
ggcgtccgcggctcgccagccccgcactcccccattccgtcgcccaggcccaccggaatg
attgggatgggtcgcccgtccagcgagctcctccagggcggcgcagcagcgttccagacg
ccggaagagagtgccattgaccagtggttcgaaaacctgcagcactacgaagctaccctt
gaagaaatggctgcggcttccctcgatgtgaatttcaaagaggagctcagcgctattgag
cagtggttccgcgtcctctccgaggccgagcgcaccgcagccctctacagcctcctccag
cactcgactcaggtgcagatccgtttctttgtcaccgtgctccaacacatggccagggcg
gacccgatgactgcccttcttagtcccgcgttcggcggttctatgcaagaccagatggac
gcaaaactcaagagcatgggtctcaagagccccgctttgaagactccggcctcgccgaac
ccacgctccttcagctcgcagcagcagcgcgcttccatggacgcgtcgacgttcctctct
gccgaaaatgctcccacttcgcccatcggtcctattggtggcgatgcggccgctgcggcg
acgcttgcccagcaacgcgccaaactcaaggccaaccgcatctcggccccggtcatgctc
aacaacggcagcggtgaacgctctgcatcgtggggttcgccgctcggtcaggttgcggag
cgcggcccatcgcctgtgcccagcgacggcggagtcagtaaccgcgacggttccacgtcc
cctgcgcccccgggcagcaacagcagcgcgcgcccaaagagcactgatttcacaggcgtg
gccagctcgttcagcaagagccgcctggacgtgccactcgaggaccagctgagccccatg
attggcggcaactgggccagcatgagcaacacgcccatcgtgcccatctttgggcctaag
agcgaccaggtgcacgccgctagcctcgacgcggccactgccaaacttcacaacctcagc
ctgagcaacacgaacccgtcgagccgcgtcgttcttgacgacgcgcgcaaattccgccgc
aactcgcgcacgaacgagcccgagggcgaggtgcaggtgaccggtcgtcgcaacgtgagc
gggagcggccttggcggacccggttgggccaacaaccttggcggcggatcgtccgggctc
ggcgtcggtggactgcgcagccccgcgctcagcaacgcgggttcgaaccggttcggcggg
agcgaccacggcgacctccaggcggcgcagcaagcgctcgcgttcgcgaacatgaacatg
agcggcatgggctcgccggcgcttgcggcagctgcggcgatgaacccgatgatggcggcg
cagctcgccgctggcggattcaacccgctgctggcgaaccagatgaacatgggcatgatg
aacccggcgatcgcggctcagttcgggacgagcccggaggcgatctttgcggcgcagatg
ggatggaacgcggcggcgagccagctcgggatgggcggcggcgggcgcgggggacgcgtg
gcgggcggcatggtgcgcaagggccccggcagcgcggcgggcggaagcacgcgaggcgcg
acagaaaagaaggacgaggacgaggtcgacccggcgctgctcaacgacattccggcgtgg
ctccgcagcctgcgcctgcacaagtacacgcctaacttcgagggcatgaactggcgcgac
atggtcgtgctcgatgaggctgcgctcgaggccaagggtgtcgcggcgctcggtgcgcgg
cgcaagatgctcaagacgttcgagaacgtgcgcgctaagatgggggtgtag
DBGET
integrated database retrieval system