Auricularia subglabra: AURDEDRAFT_182758
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Entry
AURDEDRAFT_182758 CDS
T03129
Name
(GenBank) Ku DNA-binding complex, Ku70 subunit
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
adl
Auricularia subglabra
Pathway
adl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AURDEDRAFT_182758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_182758
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_182758
Spliceosome [BR:
adl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
AURDEDRAFT_182758
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
AURDEDRAFT_182758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
VWA_2
SAP_new25
VWA
Motif
Other DBs
NCBI-ProteinID:
EJD49609
JGI:
182758
LinkDB
All DBs
AA seq
662 aa
AA seq
DB search
MSKQPDFQGWNVFDDDEEEELQQRYYGGTKDTVLFCIDASESMHEPHEDEDEGVTKSHLQ
AALEAALQVAKRKIMSGPSDHIGIMLYNTEDKSSEDLKPHTYVLQQIAPLSIQSIRELNN
IVQDALDDPETLRSSFPPNTGDRVPLGDVFSSCNWVMRYNAAKTGTKRVFLITNEDDPHP
KNSILMGTAKVNLQDLRQVGVEVLPFFIGSDEKPFDVNKFYTQVLQREDAPDTEAVPTIP
DVVTGFQDLIDKLQVRESAKRAQFSIPLHLGKGFTIGVKGYGLITEQRKTTSRKMANRGE
SYEELVAKTVYYDEELMIDAGKENIVYGMSLGAAPAPVKGGAPAAADAEDAGEEGGARKP
AGAKPTRVTAVKSRVYFTKDEVKQFRTLGLEPGLKLLGFKDRTELRFEDNVKHSLFIYPN
ESAFNGSTRTFAALLQVLAKKDKFALVVGITRANSSPAFYAMIPQEEVLDKAGAQIVPPG
FHLIVLPFADDIRSATVESAEAASDELKDAARALINKLNVKSGYDPKKFPNPALKLHYEQ
LQALAFDEPYDFEKFDDPSAPPYDVIHQRAGPLLVKWKEALDEDPASEKIKVTATGGTKR
KAAASTVGDVADAEIRSRADAGTLDKLKVDQLKAFLRSKGQSVSGKKADLTDRIQQWVDD
HP
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcagccagatttccagggctggaacgtgtttgacgacgatgaggaggaagaa
ctgcagcaacggtactatggcgggacgaaagacacggtgctgttttgcatagacgcgtcg
gagtcgatgcacgagccgcacgaggacgaggacgaaggcgtgaccaagagccacctgcag
gccgcgctcgaggccgcgctgcaggtcgccaagcgcaagataatgagcgggcccagcgac
catatcggcattatgctttacaacaccgaagacaagtcatccgaggacctgaagccacac
acatacgtcctccagcagatcgcgccgctcagcatccagtccattcgcgagctcaataac
atcgtgcaagatgcgcttgacgacccggagacgctgcgctcgagctttcccccgaacacg
ggcgacagggtaccattgggcgacgtgttctcaagctgcaactgggtcatgcggtacaat
gcggctaagacggggacgaaacgcgtgttcctcatcaccaacgaagacgatccgcaccca
aagaactccatacttatgggcaccgcgaaggtcaacctccaggacttgcgacaagtcggc
gtggaggtgctgccattcttcattggcagcgatgagaagccattcgacgtcaacaaattc
tacacgcaagtcctgcagcgcgaggacgcgccggacaccgaggccgtgccgacaatccca
gacgtcgttaccggcttccaggacctcatcgacaagctgcaggtgcgcgagtcggcgaag
cgcgcgcagtttagcatcccgctgcacctcggcaagggattcactatcggcgtcaaaggc
tacggcctcataacggagcagcgcaagacgactagtcgcaagatggcgaaccgcggcgag
tcgtacgaggagcttgtcgcgaagaccgtgtactatgacgaggagttgatgattgacgcg
gggaaagaaaacatcgtctatggcatgtctctcggcgcggcgcccgccccagtaaagggc
ggcgcgcctgctgctgctgacgcagaggacgctggggaagagggtggagcgcgaaaaccc
gcgggtgccaaaccgacgcgcgtgacggccgtcaagagtcgtgtctacttcacaaaagac
gaagtcaagcagttccggacgcttggtttggagcctggacttaagttactcggtttcaaa
gaccgtaccgagctacggttcgaggacaacgtgaagcactcgctcttcatctacccgaac
gagagcgcgttcaacggcagcacgcgcaccttcgcggcgctgctgcaggtgctcgcgaag
aaggacaagttcgcgcttgtggtcggcatcacgcgcgcgaactcaagccccgcgttctac
gcgatgataccgcaggaggaggtgctcgacaaggccggcgcacagatcgtcccgcccggc
ttccatctcatcgtgctccccttcgcggacgatattcggagtgccaccgtggagagtgcc
gaagctgcatcggacgagctgaaggacgcggcgcgcgcgttgatcaacaagctgaacgtc
aagtcgggctacgatcccaagaaattccccaacccagcactgaaactgcattacgagcag
ctgcaagcgcttgccttcgacgagccgtatgactttgagaaattcgacgacccttcggcg
ccgccgtacgatgtcatccaccaacgcgcagggcctttgctagtcaagtggaaagaggca
ttggatgaggatcctgcctcggagaagatcaaggtgactgcgacaggcggaacaaaacgc
aaggcggccgcatccactgtgggcgacgtcgcggacgccgagattagaagtagggcagac
gcaggcacgttggacaagctgaaggtggaccagttgaaggctttcctgaggagcaaaggt
caatccgtgagcgggaagaaggccgacctcacggatcgtatccaacagtgggtcgatgac
catccttga
DBGET
integrated database retrieval system
