KEGG   Auricularia subglabra: AURDEDRAFT_99228
Entry
AURDEDRAFT_99228  CDS       T03129                                 
Name
(GenBank) PIN domain-like protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
adl  Auricularia subglabra
Pathway
adl03030  DNA replication
adl03410  Base excision repair
adl03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AURDEDRAFT_99228
   03410 Base excision repair
    AURDEDRAFT_99228
   03450 Non-homologous end-joining
    AURDEDRAFT_99228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:adl03032]
    AURDEDRAFT_99228
   03400 DNA repair and recombination proteins [BR:adl03400]
    AURDEDRAFT_99228
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:adl04147]
    AURDEDRAFT_99228
DNA replication proteins [BR:adl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    AURDEDRAFT_99228
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     AURDEDRAFT_99228
DNA repair and recombination proteins [BR:adl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AURDEDRAFT_99228
Exosome [BR:adl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AURDEDRAFT_99228
SSDB
Motif
Pfam: XPG_I XPG_N
Other DBs
NCBI-ProteinID: EJD51109
JGI: 99228
LinkDB
AA seq 645 aa
MGVLGLTPFLQKKVPQVFREIPNRLRGLKDKTVVIDGTLITQRLHYSPAPHEYRHVLGWH
RIIRQLQHSGVGVICVFDGPERTLAKMRERERRQAMRNLALVRGTIEVERVNRLDQLSKL
IQTFHALPNDKRTAALQQLQTPPTGSLVDAPEPSEQVLPDALRSDVAPRWSYRRPQVVHR
WVSPYAALAASPTPPSPSTSPGPEDTAPRIAYSRPIIVHRWVPPSLSTDYVLPTPGPEIT
VYHDHEPVETYDAHTYSDDFIGTDFSAVEQGDILYDGAVDELRDTKVFAWDLEELGLPKQ
ELEALIADIDSERMRRLPAVDESSITQSLGKLYSDYRQSIPKFRVPARFEQHLEVQAESE
YAMSRYQYELMLQEGALWESLTAPDASDTAHALHVRSAAIAASYAKRNAAPSKATYEESQ
QMLRALGVPCLSSDGPHEGEAFASALVHAGVADYVASEDTDVLVYEAPLLRGLTNLRSPL
TVISGSEVREALGLSRAAFVDFALLLGTDFSRRLRGLGPMRSIALIKQHETIEAVLAARS
EPMADADREEYLHEIALARAVFNSLPDVSPATVGAPPEADEALVRELLHTYGLTHAAAED
DEPAGFGESGFGAEFWLESGHGEAAPNIGVDMFRDRPDAAILVHA
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgggggtgctggggctcacccctttcttacaaaagaaggtcccgcaggtattcagagag
atacctaatagactacgagggctcaaagacaagaccgtcgtcatagatggcacgctcatt
acgcagcggctgcactactcgcccgcgccgcacgagtatcgtcacgtcctcggctggcac
cgcattattcgacagctccagcacagcggcgtcggcgtcatatgcgtcttcgatggcccg
gaacgtacgctggccaagatgcgtgagagagagcgtcgccaggctatgcgcaacctagcg
ctagtccgtgggacgatcgaggtcgagcgcgtaaaccgtctggaccagctcagcaagctc
atacagacctttcacgccttaccaaacgataagcgcactgcggctttgcaacaactgcaa
acgcctccgaccggctcactggtcgatgcacctgagccttcagaacaagtactccctgac
gctctgaggtcagacgtcgcaccccgatggtcataccgacgacctcaagtcgtgcaccga
tgggtatcgccttacgcagcattggcagcttcaccaacgcctcctagtccttcaacgtca
ccaggaccagaggatactgcaccccggatagcctactctcgaccaatcatcgtacatcga
tgggtgcctccgtccttgtctacggactacgttctcccgacaccgggcccagaaataact
gtctaccacgatcatgagcctgtggaaacatatgacgctcatacctacagtgacgacttc
attggcacagatttcagcgctgtagaacagggcgatatactctacgacggtgctgtggac
gagctgcgggacaccaaggtattcgcgtgggatctcgaagagctcggactgccaaagcag
gagctcgaggctctcatcgccgacatcgactcggagcgtatgcgacgccttccggcggtc
gacgagtccagcataacgcaaagccttgggaagctctacagcgactatcgccagagcatc
cccaagttccgcgtgcccgcgcgcttcgagcagcacctcgaagtgcaggccgagtccgaa
tacgccatgtcgcgttaccaatacgagctaatgctgcaagaaggcgcgctctgggagtcg
ctgaccgcgccggacgcctctgacaccgcgcatgcgctacacgtgcgctcggccgccatc
gccgcgtcgtacgcgaagcgcaacgccgcgccgtccaaggcgacatacgaggagtcccag
cagatgctgcgcgcgctcggtgtgccgtgcctgtccagcgacggcccacacgagggtgag
gcgtttgcttcagccctcgtgcacgccggagtcgcggattacgtcgcttccgaagacact
gacgtgctggtttacgaagcgccgctcctccgcggcctcacgaacttgcgctcgcccctg
actgtcatctcgggctcggaggtgcgcgaggccctcgggctctcgcgcgcggccttcgtc
gactttgccctgctcctcgggaccgacttctcgcggcgcttgcgtgggctgggaccgatg
cgctccatcgcgctaatcaagcagcacgagaccatcgaagccgtcctggctgcgcgcagc
gagcccatggcggatgccgatcgcgaagagtacctgcacgagatcgcgctggcgcgcgcg
gtcttcaactcgctcccggacgtctcgcccgcgacggtcggcgcgccgcccgaagccgac
gaggcgctcgtgcgcgagctgctgcacacctacgggctcacgcacgccgcggccgaggac
gacgagccggccggctttggcgagagtggcttcggcgcggaattctggctcgagagcggg
cacggcgaggctgcgccgaatatcggagtcgacatgttccgcgacaggccggacgctgct
atcctcgtgcacgcgtaa

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