Alicycliphilus denitrificans BC: Alide_4109
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Entry
Alide_4109 CDS
T01397
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
adn
Alicycliphilus denitrificans BC
Pathway
adn03030
DNA replication
adn03430
Mismatch repair
adn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Alide_4109
03430 Mismatch repair
Alide_4109
03440 Homologous recombination
Alide_4109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adn03032
]
Alide_4109
03400 DNA repair and recombination proteins [BR:
adn03400
]
Alide_4109
Enzymes [BR:
adn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Alide_4109
DNA replication proteins [BR:
adn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Alide_4109
DNA repair and recombination proteins [BR:
adn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Alide_4109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
POTRA_TamA_1
Motif
Other DBs
NCBI-ProteinID:
ADV01813
UniProt:
A0AA85YIG8
LinkDB
All DBs
Position
complement(4296853..4297932)
Genome browser
AA seq
359 aa
AA seq
DB search
MQIPLNQLGAHLHKGLRSLYTLHGDEPLLQQEAQDAIRAAARAQGYTERSSHTVAGAHFD
WSAVLAAGGSLSLFADKQILEIRIPSGKPGKDGASALQQIAAQADGNDSTLTIVLLPRLD
KATRTGAWFSALEAHGATVQIDPVERAALPQWIAQRLAAQGQRVAPGEEGQRTLQFFADR
VEGNLLAAHQEIQKLALLHPPGELAWEQVEAAVLNVARYDVFKLSEAVLCGQVARVQRML
DGLQAEGEAEVLVHWALAEDIRALKRVKDAMNAGKPLPMALRENRIWGAKERLYERLLPQ
AGDAQLARLVHFAHVVDGIVKGLKVPDWPTSGWQALSRLALQMCRLGQSAAPAARPQFR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccctctgaaccagctcggcgcgcacctgcacaaaggcctgcgttcgctctac
acgctgcacggcgacgagccgctcttgcagcaggaggcgcaggacgccatccgcgccgcc
gcgcgcgcccagggctacaccgagcgcagcagccacaccgtcgccggcgcgcacttcgac
tggagcgcggtgctggccgcgggtgggtccttgagcctgttcgccgacaagcagatcctg
gagatccgcatcccctcgggcaagcccggcaaggacggcgcctccgcgctgcagcagatc
gccgcccaggccgacggcaacgacagcaccctcaccatcgtcctgctgccgcggctggac
aaggccacccgcacgggcgcgtggttctcggccctggaggcgcacggcgccaccgtgcag
atcgaccccgtggagcgcgctgcgctgccgcagtggatcgcccagcgtctggccgcccag
ggtcagcgcgtggccccgggcgaggagggccagcgcacgctgcagttctttgccgatcgc
gtggagggcaacctgctggccgcacaccaggaaatacaaaagctcgcgctgctgcacccc
ccgggcgagctggcctgggagcaggtcgaggccgccgtgctcaacgtcgcgcgctacgac
gtgttcaagctcagcgaggccgtgctctgcggccaggtggcgcgcgtgcagcgcatgctc
gacggcctgcaggccgagggcgaggccgaggtgctggtgcactgggccttggccgaggac
atacgcgccttgaagcgcgtgaaggacgccatgaacgccggcaagcccctgcccatggcg
ctgcgcgaaaaccgcatctggggcgccaaggagcgcctgtacgagcgcctgctgccgcag
gcgggcgacgcgcagctggcgcgcctggtgcacttcgcccacgtcgtggacggcatcgtc
aagggcctcaaggtgccggactggcccaccagcggctggcaggcgctctcgcggctggcg
ctgcagatgtgccggctggggcaatccgccgcacccgctgccaggcctcaatttcgatag
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