Acinetobacter dispersus: FPL17_18010
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Entry
FPL17_18010 CDS
T06602
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ads
Acinetobacter dispersus
Brite
KEGG Orthology (KO) [BR:
ads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ads03016
]
FPL17_18010
Enzymes [BR:
ads01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
FPL17_18010
Transfer RNA biogenesis [BR:
ads03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
FPL17_18010
Prokaryotic type
tRNA splicing ligases
FPL17_18010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QHH99333
UniProt:
A0A6P1LRK3
LinkDB
All DBs
Position
complement(3831386..3832591)
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AA seq
401 aa
AA seq
DB search
MGIQKILNADAQYGVPVKIFTNDIDSESIEQLKKMAQLQFVYSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLNLKASQLPDNLAPLRHAIERKVPVGFELHKQVK
AKASSIIPLEKCLQPIIKKHPGLVRMLRKFDATWQKQLGTLGGGNHFIELCLDENQDVWV
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSNSFNDYVEAVEWAQEY
AFENRREMMRLILEAIRPLLPPFQMTKEAINCHHNYVSQETHFGEDLLITRKGAIRAGQD
ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKLLFSQDDLIKQTQGIECR
KDSAVIDEIPAAYKDIDQVMANQSDLIEIVHTLKQILCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaaaatacttaatgcagatgcacaatatggcgttccagtgaaaatcttc
acgaacgatattgatagcgaaagcattgaacaactgaaaaaaatggcacaactgcaattt
gtttattcacatattgccgtgatgcctgatgtgcatgtaggtaaaggcgccactgtaggc
agtgtaattccgaccaaacacgccatcattcctgccgctgtcggtgttgatatcggctgt
ggaatgaatgcaataaggctcaatctaaaagcttcacagcttccagacaaccttgcaccg
ctacgtcatgcaatcgaacgcaaagtccctgtaggctttgaactacataaacaagtgaaa
gcaaaagcttcaagtatcatcccacttgaaaaatgcttacaacccatcattaaaaaacat
cccggcttagttcgaatgttaagaaagtttgatgccacttggcagaaacaactgggaact
ttaggtggtggtaatcactttatcgaactctgccttgatgaaaatcaggatgtctgggtg
atgctacattcaggcagccgtggcttaggcaatgtgattggaacctacttcatcgaactg
gcaaagaaagaagctcagcatcgatttggacatgtaccagataaagatttgagttatttt
gcggaaggttcaaatagctttaatgattatgtggaagctgttgagtgggcacaagaatat
gcgtttgaaaatcgacgtgaaatgatgcgtctaattttagaggcaattcgaccattactc
cccccttttcaaatgaccaaagaagcgattaattgccaccataattacgtcagtcaagaa
actcattttggtgaggatctcttaatcacacgtaagggggcaattcgagcgggccaagat
gaattaggtatcattcctggctcaatgggagcacgctcctatattgtaaaaggtaaagcc
aatcctgagtccttctgttcatgctcacatggcgcaggacgaaaaatgagccgcagtaaa
gccaagctgctgtttagtcaagatgacttgattaagcagactcaaggcatcgaatgccga
aaggacagtgcagtgattgatgaaattccagctgcttataaagatattgatcaagtcatg
gccaaccaatctgacttgattgaaatcgtacatacacttaaacaaattttatgtatcaaa
ggataa
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