Acromyrmex echinatior (Panamanian leafcutter ant): 105147001
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Entry
105147001 CDS
T03917
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aec03000
]
105147001
Transcription factors [BR:
aec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105147001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
TFIIA
DDHD
SPATS2-like
Motif
Other DBs
NCBI-GeneID:
105147001
NCBI-ProteinID:
XP_011055990
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MHTMETDLKGGSLHAQMPPHPHQGVSPMGHHTGMSPYGSLGSIVHSSALSGSPPNAGGLS
LGLQHHHQTSQHHYAMSAAAVAAAAVQQQQQQQQQQSMHAMAVQQSAQQQQHHAHQQSQQ
QQSQSQQHHQANNHSNPNNPNNPNNSSNAKNNNMDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSEGEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLVKKDK
FQLSGVGGVSGMLGVDQRQVGTSGGPQQPQLPRDVYQMPNGYMPNGYMMSDPTSYQQHVA
YSSHMSTATAASTVAYPRYDSMGHHISGSSPSPINMNGYGGYGGYGATVPGGSPSPYHQA
QTGSQISSSHSPSGSSIKSEPTSPASGGIHTPTPTGGPTTTGAAGPAGQVKREYMGQQQA
NQQTQGDLRQMISMYLPQGIEQGVVQHGNVYPPGPSPDSLTQHHTMQPISHMSDSDRKML
NPETGCYSESVRAWYQWLEKTRYVTL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatggagacggacttgaagggcggcagtctgcatgctcagatgccaccgcat
ccacatcagggtgtatcaccgatgggccatcatacagggatgtctccttatggatcttta
ggctcgatagttcatagctctgcactgtcgggaagtccacccaacgcgggtggcttgagt
cttggtcttcaacatcatcaccaaacttctcagcatcattatgcaatgtcagctgccgcc
gtcgccgccgcagctgtacaacagcagcagcaacaacagcaacaacagagcatgcacgca
atggcggtccaacagagcgctcagcaacagcaacatcacgctcatcagcaatctcaacag
cagcagtcgcaatcacagcaacatcatcaagctaataatcatagcaatccaaataatcct
aacaaccccaacaattcttccaacgccaagaataataacatggatcgcgtaaagaggccg
atgaatgctttcatggtatggtcgcgtgggcagcgacgtaaaatggctcaagaaaacccc
aaaatgcacaattctgaaatatcgaaacgccttggtgccgaatggaaacttctcagcgaa
ggggaaaagcgtccgtttatcgacgaagcgaagcggctgcgtgctgttcatatgaaggag
catcccgattacaagtatcggccgcgccgcaagacaaagacgctcgtaaagaaagacaag
ttccagctcagcggagttggtggagtcagcggaatgctcggcgtggatcaacggcaagtg
ggtaccagtggaggacctcagcaaccgcaattgccgcgtgacgtatatcagatgcccaac
ggatacatgcccaacggttacatgatgtctgatccgacatcgtatcaacaacacgttgcg
tatagcagtcacatgagtacagcaaccgctgcctcaactgtggcctaccccaggtacgat
tctatgggacatcacatcagtggcagcagtcccagccctatcaacatgaacggctatggc
ggatacggcggatatggtgctactgtacctggcggatcaccatcaccttaccatcaggct
caaacgggttctcaaatatccagtagtcatagtcctagtggcagcagcataaagtccgag
ccgacgagcccggcgagcggtggcatacacacaccgacgccgacgggcggcccaacgacg
acgggcgcggctggtcctgccggccaggtcaagagggaatacatgggacagcaacaagcg
aaccaacagacacaaggcgatcttcggcagatgatctcaatgtatctgccacaaggcatc
gagcagggagtcgtgcaacacggaaacgtctatccaccgggtccatcacctgattctttg
acgcagcaccataccatgcagcccatttcacacatgtcagatagcgatcgtaaaatgttg
aacccagagactggctgctactccgaatccgtacgagcatggtatcagtggctggagaaa
acgcgttacgtgactctttga
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