KEGG   Acromyrmex echinatior (Panamanian leafcutter ant): 105148421Help
Entry
105148421         CDS       T03917                                 

Definition
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
aec  Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03030  DNA replication
aec03410  Base excision repair
aec03420  Nucleotide excision repair
aec03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105148421
   03410 Base excision repair
    105148421
   03420 Nucleotide excision repair
    105148421
   03430 Mismatch repair
    105148421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aec03032]
    105148421
   03400 DNA repair and recombination proteins [BR:aec03400]
    105148421
Enzymes [BR:aec01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105148421
    6.5.1.6  DNA ligase (ATP or NAD+)
     105148421
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     105148421
DNA replication proteins [BR:aec03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    105148421
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     105148421
DNA repair and recombination proteins [BR:aec03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     105148421
   NER (nucleotide excision repair)
    Other NER factors
     105148421
   MMR (mismatch exicision repair)
    Other MMR factors
     105148421
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 105148421
NCBI-ProteinID: XP_011058436
LinkDB All DBs
Position
Unknown
AA seq 980 aa AA seqDB search
MLKILTTCSRLSSLALPIRRLELAVAAHTRFVVFNWIHTTNSHNLSDKQNQNATENGKRK
RDSSNSSSSPSNNVKRTKSKTVSKTPSPSVKPRKLGATPKIKPSKLSPGASKKAEKRQLK
DTPGKKKKKEEAENINDVEEKNNHIENGITEEKNKKEESTFSTKKLKSNEVEKVKKSAKK
KWSKIVQLVDSSDDETHLPLPESPKKSETDNEEKKTESVDKSSNINKNVSDNASDNDANE
SASNNEEKNLNPKKESTPENSETPSKNESSKKESTPEKSQTPSKDENPKKEPTPNKKAKK
VPNFFMSKQKGDAKGDKVNNGKSANQSYNPSASVYHPIDDACWKRGDKTPYSAFARTLEI
IEETSARLKIIEILSNYFRSVIVLSPEDLLPSVYLCLNQLAPAYEGVEFGIADTNLMKAI
AQCTGRTLAQIRADVQEVGDLGIIAENSKSNQRTMFQPAPLTVPNVYSRLMEIAQMTGHA
SLSKKLDKIQTLFVACRNTEARYLVRLLAGKLRIGLAEQSVLQALALACAMTPPEQKYPP
EILNASKKISSDRFKEKYDEIALILKTTYCECPNYNLIIPVLLEDGINTLPSKCKLTPGI
PLKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHVADNGQIKIYSRNQEDNTTKY
PDIIKRFKNSRGDEVKNCILDCEAVAWDNEKKQILPFQILSTRKRKDANEEDIKVQVCVF
MFDLLYLNDEPLVKEPFVKRRELLKQHFKEVEGEWKFANSLDASTMEEVEVFLDESVKGN
CEGLMVKTLEKEATYEIAKRSRNWLKLKKDYLDGVGDTLDVVVIGGYIGKGKRTGTYGGF
LLACYDLENEEYQSICKIGTGFKEDDLENHTKFFKDHIVPQVKSYYRFDSSHEPDHWFEP
VQVWEIKCADLSLSPVHRAAIGIVDPEKGISLRFPRFIRIREDKTCEQATSAQDVANMYN
NQEQIKNKTSVSKATEEDFY
NT seq 2943 nt NT seq  +upstreamnt  +downstreamnt
atgctaaaaatcctcactacatgctcgcgcttgagctcgctggctttgccgattcgacgg
ctagagctcgcagtcgcagctcacactcgatttgttgtttttaattggatacatacaacc
aacagccacaacttgtcagacaaacaaaatcagaatgcaacggagaatggcaaacggaaa
agagatagcagcaacagttccagttcaccttcgaataatgttaaacgtacaaagtcaaag
acggtttccaagacaccttcgccaagtgttaagcctcgcaaactaggagctaccccaaaa
attaagcctagtaagctttcccctggagcatcaaaaaaggcagaaaaaaggcaattgaaa
gatacccctggtaaaaagaaaaagaaggaagaggctgaaaatataaatgatgttgaagag
aagaataatcatatagaaaacggtataactgaagagaaaaataaaaaagaagaatctaca
ttttcaacgaagaaattaaagtctaatgaggtagaaaaagtaaagaagtctgcgaaaaag
aaatggtccaagatagtgcaactggtagattctagtgatgatgagactcacctaccttta
cctgaaagtccaaaaaaatcagagactgacaatgaggagaagaagactgaaagtgtagac
aagtccagcaacataaataaaaatgtttctgataacgcttctgataatgacgcaaacgaa
agtgcttcaaacaatgaagagaaaaatctaaatccgaagaaagagtctacacctgagaac
tcggagactccctctaagaatgaaagttcaaagaaagaatctacacccgagaaatcccag
actccctctaaggatgaaaatccgaagaaagagcctactcctaacaaaaaggctaagaaa
gtgcccaacttttttatgtctaagcaaaagggcgacgcgaaaggtgacaaagtgaacaat
ggaaaaagtgccaaccaatcttacaatcccagcgcgtctgtctatcatccgatagacgat
gcgtgctggaaacgaggggacaaaactccatatagcgcattcgcgcgcaccttggaaatc
atcgaagaaactagtgcaagattaaagataatagagatactatcaaattacttccggtct
gtcatagttctgagccccgaggatcttttgccgagcgtttatctgtgccttaatcaatta
gcgccagcgtatgaaggagttgagtttggaatcgctgatacgaatctgatgaaggcgata
gcgcaatgtactgggagaacactggcgcaaattagagctgatgtccaggaggttggcgat
ttgggaattatagcggaaaatagtaaatctaatcagagaactatgtttcaaccggcgcca
ttgacagttcccaatgtatactccagattgatggaaattgctcagatgacaggacatgcg
tctctatcgaaaaagttggataaaattcagacgctgtttgtagcgtgccgaaatacagaa
gcaagatatttagttagattgttagctgggaagcttcgcattggattggcggaacaatct
gttttacaagcattggctttagcttgcgcaatgacacctccggaacaaaagtatccacca
gaaattctaaatgcaagcaaaaagatatcgagtgatcgtttcaaagagaaatatgatgaa
atagcgcttatattgaaaacaacgtattgtgaatgtccgaattataatcttataattcct
gttttgctggaagatggaattaataccttgccgagcaagtgcaaacttactcctggaata
cccttgaaacctatgttagcgcatcctactaaaggtgttcaagaagttctaacgcgattt
gagggtttgaaatttacttgtgaatggaaatatgacggggaaagagctcagatacatgtt
gcggacaatggtcaaataaaaatatacagtagaaatcaggaggacaatactaccaagtat
ccagatatcattaagcgattcaagaatagtcgcggtgatgaagtgaagaattgtatactg
gattgtgaggcggtcgcttgggataatgagaagaaacaaattttaccgttccaaatactc
agtacaagaaagcgaaaggatgctaatgaggaggacattaaagtacaagtatgtgtgttt
atgtttgatctgttatatctaaatgacgagccattagtgaaggaaccgttcgtgaaacgt
cgtgagttgttgaaacagcatttcaaggaagtggaaggcgaatggaaattcgctaatagt
ttagatgcctcgacgatggaagaggtggaagtttttttggacgaatctgtgaagggaaat
tgcgagggtttgatggtaaagacgttggaaaaggaggcgacctatgagatcgcgaagcga
tcgagaaactggctgaagttaaaaaaggactacttagatggcgtcggcgatacgctcgac
gtagttgtaatcggtggttacatcggcaaaggaaagaggaccggcacttatggtggtttc
ctcttagcttgttatgatctggaaaatgaagagtaccagagcatttgtaagatcggtacg
ggattcaaagaagatgatctcgaaaatcataccaaattcttcaaggatcacatagtacca
caggtcaaatcgtattatcgcttcgatagcagccatgaaccggatcactggtttgaacca
gttcaagtttgggagatcaagtgtgccgatctttccctttcgcctgtacacagagcggct
atcggaatagttgatccggaaaagggaatatctttaaggttcccacgatttatcaggatc
cgcgaggataagacctgcgagcaggccacttccgctcaagacgtggcaaatatgtacaat
aatcaagaacagataaaaaataaaacttcagtatcgaaagccacggaggaagatttctat
taa

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