KEGG   Acromyrmex echinatior (Panamanian leafcutter ant): 105150076Help
Entry
105150076         CDS       T03917                                 

Definition
(RefSeq) histone deacetylase Rpd3 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
aec  Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec04213  Longevity regulating pathway - multiple species
aec04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:aec00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    105150076
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    105150076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aec03036]
    105150076
Enzymes [BR:aec01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105150076
Chromosome and associated proteins [BR:aec03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     105150076
   HDAC complexes
    Sin3A-HDAC complex
     105150076
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105150076
  Chromatin remodeling factors
   NuRD complex
    105150076
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl
Motif
Other DBs
NCBI-GeneID: 105150076
NCBI-ProteinID: XP_011061202
UniProt: F4WWT9
LinkDB All DBs
Position
Unknown
AA seq 497 aa AA seqDB search
MDPVKMSMQPHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYR
PHKATADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAG
GSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI
DVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDD
SYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPF
LMVGGGGYTIRNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHISPSNMANQNT
PEYLDKIKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSEAEEKTNPDDRLPQRELDKRM
QHENEYSDSEDEGEGGRRDNRSYKGSRKRPRLEKGQEAMDTDLKKDEDIKAESKENEKDD
KVNPTNEETKKDGGANP
NT seq 1494 nt NT seq  +upstreamnt  +downstreamnt
atggatccagtaaaaatgtctatgcagccgcatagcaggaaacgtgtctgctactattac
gacagtgatattggaaattactattatggtcaaggacatcctatgaagccacatcgtata
aggatgacgcataatttacttttgaactatggactttataggaagatggaaatataccgg
cctcataaagccacagcagatgagatgacgaaatttcacagtgatgaatatattagattt
ctgaggtctataaggccagataatatgtcggaatataacaaacaaatgcaacgatttaat
gtgggagaagactgccccgttttcgatggtttgtatgagttttgtcaattatcagccggc
ggatctgtagccgctgctgtaaaacttaataagcaagcttctgaaatctgcattaattgg
ggcggcggtttacatcatgcaaaaaagagcgaagcttccggcttttgttatgtaaatgac
attgtgcttggaatattggaattgctgaagtatcatcagagagttttgtatatcgatatt
gatgttcatcatggcgatggcgtagaagaagctttttatacaacagatagagtaatgact
gtttcattccacaagtatggcgaatattttcctggaacaggagatcttcgtgatattggg
gcaggcaagggaaaatattatgcggttaatatacctttgagagatggcatggatgacgat
agttatgaatcaatctttgtccctatcatctcaaaagtgatggaaacatttcaaccctct
gctgttgttctacaatgtggggctgattcattgactggcgatcgactgggatgttttaat
ttaactgtaagaggccacggtaaatgcgtggaatttgtgaaaaaatataatttgcctttc
ttgatggttggaggtggtggttataccatcagaaatgtgtccagatgttggacgtacgaa
acatcggttgctctcggctgcgagatcgctaatgagcttccgtataatgattattttgaa
tattttggcccagacttcaaattacatattagtccatcgaatatggcgaaccaaaacact
cctgaatatctagataaaataaaaacgaggttgtttgaaaatttaagaatgctacctcac
gcgcctggcgtacaagtccaggcaataccggaggatggtgcggttattgaagactcggaa
gctgaagagaagacaaatccagacgatagattgccccaacgcgagctagataaaagaatg
caacatgaaaacgaatatagtgatagtgaagatgaaggcgaaggcgggcgaagagataat
agatcgtataagggatctaggaagcgaccccgtttggaaaaaggtcaagaggccatggat
accgacttaaagaaagatgaagatataaaggcagaatcaaaagaaaatgagaaggacgat
aaagtaaaccccacgaatgaggagactaagaaagatggcggagcgaatccctga

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