Alkalilimnicola ehrlichii: Mlg_2230
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Entry
Mlg_2230 CDS
T00391
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
aeh
Alkalilimnicola ehrlichii
Pathway
aeh02020
Two-component system
aeh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aeh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Mlg_2230
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mlg_2230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aeh03021
]
Mlg_2230
Transcription machinery [BR:
aeh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mlg_2230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_21
TrmO_C
Motif
Other DBs
NCBI-ProteinID:
ABI57572
UniProt:
Q0A6G5
LinkDB
All DBs
Position
2532778..2534295
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AA seq
505 aa
AA seq
DB search
MATVMKQSLQLRLGQQLTMTPQLQQAIRLLQLSTLDLQMEIQQQLESNVMLELAEEDQQE
TEQRTEEGETQDTEGERGDEASTEEATEAGTAGEETAAQEQADIPEDLPLDSNWDDIYDG
STPWSQPDSEDEDRDPYANRSGGGETLHDHLTWQAELTPFTDRDAAIAQVIIDSVRDDGY
LGAGIEELISALPAEWAVEPDEVEAVLRRIQHFDPVGVAARDPREALLIQLEQLPPDTPL
LPEARRLVDLHLDMLVQRQYAQLCRRMKLNQDQLREVLGLIQTLDPRPGSQIGGDETQYV
VPDVVVRRSDGRWQVELNPATAPRLRVNSYYASLIKRADNSSDNTTLRNHLQEARWFIKS
LLSRNDTLLKVARCIVERQQGYFDHGEEAMQPLVLREVAEAVDMHESTISRITTRKYMHT
PRGTLEFKYFFSSHVQTVDGGECSATAIRARIRRLIADENPTKPLSDSRIANILQEEGIN
VARRTVAKYREAMAIASSSERKRLA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacggtcatgaaacaatcgctgcaacttcgactcgggcagcaactcactatgacg
ccacagctgcaacaggccatccgcctgctgcagctctccaccctggatctgcagatggag
atccagcagcagctcgagtccaacgtcatgctggaactcgccgaagaggaccagcaggag
accgaacagcgcaccgaagagggcgagacccaggacacggagggcgagcgcggggacgag
gccagcaccgaggaggccaccgaggccgggaccgcgggcgaggagaccgccgcccaggag
caggccgacatccccgaggacctgccgctggactccaattgggatgacatctacgacggc
agcaccccctggagccagccggacagcgaggacgaggaccgcgacccctacgccaaccgc
tccggtggcggtgaaaccctgcacgaccacctgacctggcaggcggagctcacccccttc
accgatcgggacgcggccatcgcacaggtcatcatcgactccgtgcgcgacgacggctac
ctgggcgccggcatcgaggagttgatctccgccctgccggcggagtgggccgtggagccc
gatgaggtcgaggcggtgctccggcgcatccagcacttcgacccggtgggcgtggccgcc
cgcgatccgcgtgaggcgctgctcatccagctcgagcagctgccgccggacaccccactg
ctgcccgaggcccggcgcctggtggatctgcacctggacatgctggtacagcgccagtac
gcccaactctgtcggcgcatgaagctcaatcaggaccagcttcgcgaggtcctgggcctg
atccagaccctcgatccgcggccgggctcgcaaatcggtggcgacgagacccagtacgtg
gtccccgacgtggtggtccggcgcagcgacggccgctggcaggtggagctcaatcccgcg
accgccccccggctgcgggtcaacagctattacgccagcctgatcaaacgcgccgacaac
agcagcgacaacaccaccctgcgcaaccacctgcaggaggcgcgctggttcatcaagagc
ctgcttagccgcaacgacaccctgctcaaggtcgcccgctgcatcgtcgagcgccagcag
ggctacttcgaccacggcgaagaggccatgcagccgttggtcctgcgcgaggtggccgag
gcggtggacatgcacgagtccaccatctcccggatcaccacccgcaagtacatgcacacc
ccgcggggcaccctggagttcaagtacttcttctccagccatgtgcagacggtggacggc
ggcgagtgctccgccaccgccatccgtgcccgcatccggcgtctgatcgccgatgagaac
cccaccaaaccactcagtgacagtcgtattgccaatatcctccaggaggagggcataaac
gtggcaagacggaccgtagccaagtatcgtgaggctatggccatcgcgtcctcgtcagag
cgcaagcgactggcctga
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