Altererythrobacter epoxidivorans: AMC99_00723
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Entry
AMC99_00723 CDS
T04070
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aep
Altererythrobacter epoxidivorans
Brite
KEGG Orthology (KO) [BR:
aep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aep03016
]
AMC99_00723
Enzymes [BR:
aep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AMC99_00723
Transfer RNA biogenesis [BR:
aep03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AMC99_00723
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALE16028
UniProt:
A0A0M4M381
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All DBs
Position
complement(681631..682827)
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AA seq
398 aa
AA seq
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MKIHDLITTTEALQELCERLAKSDFVTVDTEFMRENTYWPELCLVQIANEEEAAAIDPLA
DGIDLTPLLDLMCNNEDVLKVFHAGGQDVEIIVNLAGKTPHPIFDTQIAMMAISQSEQIG
YANLVESWLGFTIDKGARFTDWSRRPLTDRQIEYAIGDVTHLSEIFPKILEKLIKTDRGA
WLDAEMDKLADVSNYVIDPDQAWRRIRSPGRNPQVLGRLKALAAWREGEAQHKNIPRGRI
MRDETLADIASHPPKQQKDLAKVRGLSSAWRDNDIGKRLLKVLEKAEPLDKDELPEKMKR
GAPLGKEGALVADLLKLLLKIRAREIDVAARLLTKAEEMEALAAGIRDLPVLQGWRYEVF
GRDALELVEGRLAFAVKDGKLNMTHIDDMPEQMTQAAE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacatgatctgattaccacgaccgaggcgcttcaggaactctgcgagaggctc
gcgaaatccgatttcgtgacggtcgataccgaattcatgcgcgaaaacacctattggccg
gaactctgcctcgtgcagattgccaatgaggaagaggctgcagcgatcgatccgctggca
gatggcatcgacctgaccccgctgctggacctgatgtgcaacaacgaggacgtgctcaag
gttttccacgcgggtggccaggatgtcgagattatcgtcaatctcgccggcaagacgcct
caccccattttcgatacgcaaatcgcgatgatggcgattagccagtccgaacagatcggc
tatgccaacctcgtcgaaagctggctgggcttcaccatcgacaagggtgcgcgtttcacc
gactggagccgccgcccgctgaccgatcgccagatcgaatatgccatcggtgacgtcacg
cacctttccgaaatctttccgaagatcctcgaaaagctgatcaagaccgatcgcggcgct
tggctagatgccgaaatggacaagctggccgacgtttcgaactatgtcatcgatccggac
caggcatggcgccggatccgttcgcccgggcgcaacccgcaggtcctcggccggttgaag
gcgctggccgcatggcgcgaaggcgaagcgcagcacaagaatatcccacgcggccgcatc
atgcgcgacgaaacgctggccgatatcgccagccatccgcccaagcagcagaaagacctc
gccaaggttcgcggtctctcgagcgcctggagggacaacgacatcggcaagcgcctgctg
aaagtgctcgaaaaggccgaaccgctcgacaaggacgaactgcccgaaaagatgaagcgt
ggcgcaccgctgggcaaggaaggcgcacttgttgccgacctgctcaagctgttgctcaag
atcagggcgcgggaaatcgatgtcgctgcccgcttgctgaccaaggcagaagaaatggaa
gcgctggcagctggcatccgcgatctgccggtgctgcagggctggcgctacgaagtgttc
ggccgcgacgcactggaactggtcgaaggccggctcgccttcgcggtaaaggacggcaag
ctgaatatgacgcacatcgacgacatgcccgaacagatgacgcaggcagccgaataa
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