KEGG   Altererythrobacter epoxidivorans: AMC99_02576Help
Entry
AMC99_02576       CDS       T04070                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
aep  Altererythrobacter epoxidivorans
Pathway
aep03030  DNA replication
aep03410  Base excision repair
aep03420  Nucleotide excision repair
aep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AMC99_02576
   03410 Base excision repair
    AMC99_02576
   03420 Nucleotide excision repair
    AMC99_02576
   03430 Mismatch repair
    AMC99_02576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aep03032]
    AMC99_02576
   03400 DNA repair and recombination proteins [BR:aep03400]
    AMC99_02576
Enzymes [BR:aep01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AMC99_02576
    6.5.1.6  DNA ligase (ATP or NAD+)
     AMC99_02576
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AMC99_02576
DNA replication proteins [BR:aep03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    AMC99_02576
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     AMC99_02576
DNA repair and recombination proteins [BR:aep03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AMC99_02576
   NER (nucleotide excision repair)
    Other NER factors
     AMC99_02576
   MMR (mismatch exicision repair)
    Other MMR factors
     AMC99_02576
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: ALE17849
UniProt: A0A0M5L026
LinkDB All DBs
Position
complement(2542188..2543780)
Genome map
AA seq 530 aa AA seqDB search
MEEFAALVDALVYTRSRNEKLRLIAEYLRETPDPDRGWALAALSDGLDFPAVKSSTIRNL
LKDRIDPVLWTLSRDFVGDTAETASLLWPAPDNEPTPPTVSEAVELLSAMSRKSVLSELP
KLLDRLDSSGRYALLKLATGGMRIGVSSRLAKTAFAQAFEVSVDEVEEYWHGIDPPYSAL
FDWAAAGADPPDTKSLPTFRPFMLAHPLEETVVSLEDYAAEWKWDGIRVQLVHAGGETRL
YSRSGDDISQTFPELLGALDFRAVLDGELLVRGAHQGGEEGGAASFNALQQRLGRKTVSK
KMLAEYPAFVRLYDALIVDGEDLREKPWRERRKRLEKLVERLSDQHFDLSQVIDAKDFEH
LAQIREGARDDSIEGVMLKLRDSPYIAGRKTGLWYKWKRDPLLIDCVLMYAQRGSGKRSS
FYSDYTFGCWDGDPDKGAELLPVGKAYSGFTDEELKKLDRHVRTNTINRFGPVRETDKSL
VFEVAFDSVHDSKRHKSGLAMRFPRIHRIRWDKPAHEADRIESLRALIRD
NT seq 1593 nt NT seq  +upstreamnt  +downstreamnt
gtggaagagttcgccgccctggtcgatgcgctggtctatacccgcagccggaacgagaag
ctccggctgattgcggaatacctgcgcgaaacgcccgaccccgaccggggctgggccctt
gccgcgctgagcgacggcctcgattttcccgcggtcaaaagctcgaccatccgaaacctg
ctcaaggatcgcatcgatcccgtgctatggacgctaagccgcgatttcgtgggggacacg
gcggaaacggcgagcctgttgtggcccgccccggataacgaaccgaccccgccgactgtc
agcgaagccgtcgagttgctttccgcgatgagccgtaaaagcgtgctcagcgaacttccc
aaattgctcgatcggctcgattcgtcgggacgttacgccctcctgaagctggcgacgggc
ggtatgcgcatcggcgtttcgagccgcctggccaagaccgctttcgcccaggccttcgaa
gtgtctgtcgacgaggtggaggagtattggcacgggatcgacccgccctattccgccctg
ttcgattgggcggcggccggtgccgatccgcccgacacgaagagcctgccgacgttccgc
cccttcatgctggctcacccgctggaagaaacggtcgtcagcctcgaagactatgctgcc
gaatggaagtgggacggcatccgcgtccagctggtgcatgcaggtggcgaaacacgtctc
tactcgcgcagtggcgacgacatcagccagacctttcccgaactgctcggcgcgctcgat
ttccgggcggtcctcgacggcgaactgctggtccgcggtgcgcatcagggcggagaagaa
ggcggtgccgctagcttcaacgccttgcagcaacgcctgggacgcaagaccgtgagcaag
aagatgctcgccgaatatcctgccttcgtgcggctttacgacgcgctgatcgtcgatgga
gaggatttacgcgagaaaccctggcgcgaacggcgcaaacggttggagaagttggtcgaa
cgcctctccgaccagcacttcgacctgtcacaggtgatcgacgccaaagatttcgagcat
ctggctcagattcgggaaggtgcgcgagacgattcgatcgaaggcgtcatgctcaaacta
cgcgacagcccctatatcgcgggccgcaagacgggcctgtggtacaagtggaagcgcgat
ccgctgctgatcgactgcgtgctgatgtatgcccagcgcgggagcggcaaacgctcgagt
ttctattccgattacaccttcggctgctgggatggcgatcccgacaagggcgcagaactg
cttccggtgggcaaggcgtactcagggttcacggacgaggaattgaaaaaactggatcgg
cacgttcgcaccaatacgattaaccgatttggccctgttcgcgagaccgacaagagcctc
gtgttcgaagtcgctttcgacagcgtgcacgacagcaagcggcataaaagcggccttgcc
atgcggttcccgcgtattcaccgcatcaggtgggacaagcccgctcacgaagccgaccgc
atcgaaagtctgcgggcactgatccgggattga

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