KEGG   Alistipes finegoldii: Alfi_0583
Entry
Alfi_0583         CDS       T02133                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
afd  Alistipes finegoldii
Brite
KEGG Orthology (KO) [BR:afd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:afd02048]
    Alfi_0583
Enzymes [BR:afd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Alfi_0583
Prokaryotic defense system [BR:afd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Alfi_0583
SSDB
Motif
Pfam: SWI2_SNF2 EcoR124_C ResIII HSDR_N SNF2-rel_dom DUF4028
Other DBs
NCBI-ProteinID: AFL76970
UniProt: I3YJ02
LinkDB
Position
complement(654126..656954)
AA seq 942 aa
MSIQSEAALEAGLIATLRQMDYEYVQITEEDNLYANFKRQLEIHNKKQLAEVGRNSFTDE
EFEKILIYLEGGTRFEKAKKLRDLYPLDTMNGQRIWVEFLNRTQWCQNEFQVSNQITVEG
RKKCRYDVTILINGLPLVQIELKRRGVELKQAYNQIQRYHKTSFHGLFDYIQLFVISNGV
NTRYFANNPNGGYKFTFNWTDAANLPFNELDKFAVFFLEKCTLGKIIGKYIVLHEGDKCL
MVLRPYQFYAVEKILDRVQNSNDNGYIWHTTGAGKTLTSFKTAQLVSELDDVDKVMFVVD
RHDLDTQTQSEYEAFEPGAVDGTDNTDELVKRLHSNSKIIITTIQKLNAAVSKIWYSSKI
DSICHSRIVMIFDECHRSHFGESHKKIMQFFDNAQIFGFTGTPIFTENAVDGHTTKEVFG
NCLHRYLIKDAIADENVLGFLVEYYHGSEEVQNGSTNRMTEIAKFILNNFNKSTFDGEFD
ALFAVQSVPMLIRYYKIFKELNPKIRIGAVFTYAANGSQDDDLTGMGTGSYLNDSAGEVD
ELQAIMDDYNEMFGTSFTTENFRAYYDDINLRMKKKRVDMRPLDLCLVVGMFLTGFDSKK
LNTLYVDKNMEYHGLLQAFSRTNRVLNEKKRFGKIVCFRDLKSNVDTAIKLFSNSNNPEE
IVRPPFEEVKQEYKELATNFLKKYPDTNCIDLLQSEKAKKEFVLAFRDIIRKHAEIQIYE
DYNEESDDLGMTEQQFMDFRSKYLDIHDTFALVVPAPSPKPDDDTDVPDDGDLGDVDFCL
ELLHSDIINVAYILELIAELDPYSADYAERRQNIIDTMIKDAEMRSKAKLIDGFIQKNVD
DDKENFMMQRGKADGTSDLEERLNRYIAVERENAVNSLAEEEKISSSVLNHFLKEYDYLQ
KEQPEIIQKALKEKHLGLIKTRKALTRILDRLRNIIRTFSWD
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgtcaatacagagcgaagcggcattggaagccggacttatagccacacttcggcaaatg
gactacgagtatgtccagattaccgaagaagataatctttatgccaacttcaagcggcag
ttggaaattcacaacaagaaacagctggcggaagttggtcgtaactcatttacggatgaa
gagtttgagaagatattgatatatctggaaggtggtactcgctttgaaaaggctaagaaa
cttcgtgacctatatcctcttgacacgatgaacgggcagcgtatttgggtggaattcctt
aatcgtacacaatggtgtcagaacgagtttcaggtgtcgaatcagattacggtggaggga
cgaaagaagtgtcgctatgatgtgacgattcttatcaatggcctccctctggttcagatt
gaattgaagcgtcggggtgtagaactcaagcaggcatacaatcagatacaacgctatcat
aagacatcctttcatgggctgttcgactatattcagctatttgttatctccaatggcgta
aatactcgttatttcgccaataatcccaatggtggatataaattcacgttcaactggacg
gatgcggcaaatctgccattcaatgaactggataagtttgctgtatttttcttggaaaag
tgtacgctcggtaagattatcggaaaatatatcgtattgcatgaaggggataaatgcttg
atggtacttcgcccataccagttttatgctgtagaaaagatattggatcgggtacagaac
tccaacgataacggttatatctggcatactacaggcgcaggaaaaaccttgacttcattc
aaaacagcacagcttgtttcggagttggatgatgtagataaggtaatgttcgttgttgac
cgtcatgaccttgacacacaaacgcagtcggaatatgaagcctttgaaccgggagctgtt
gacggtacggacaatacggatgaactggtaaaacggctgcatagtaactccaagattatc
attaccactattcagaaactcaatgctgccgtaagtaagatatggtacagcagcaagata
gattcgatatgccactcccgtatcgtgatgatatttgatgagtgccaccgcagtcacttc
ggggagagtcataagaagattatgcaattcttcgataatgcccagatattcggttttacc
ggaactcctatttttacagaaaatgcagttgatgggcatacgaccaaagaggtattcggc
aactgcctgcatcgctatctgattaaagatgccattgccgatgaaaatgttctcggtttc
cttgtagagtattatcatggcagtgaggaagtgcagaacggcagtactaatcgcatgacg
gaaatcgctaaattcatccttaataatttcaataagtcaacatttgacggagagttcgat
gcattgtttgctgtacagtccgtaccgatgcttatccgttattacaagatattcaaggaa
ctgaatcccaagattcgtataggtgcagtttttacttatgcagccaatggaagtcaagat
gatgatctgacaggaatgggtacaggttcttatctgaatgacagtgccggtgaggttgat
gaactgcaagccatcatggatgactacaatgaaatgttcgggacatcgtttacgacagag
aacttccgtgcatattacgatgacatcaacctgcgtatgaaaaagaagcgagttgatatg
aggccgcttgatctttgtctggtcgtcggaatgttccttaccggttttgacagcaagaaa
ctcaatacgctttatgtagacaagaatatggaataccacggcttgttgcaggcattcagc
cggacaaaccgtgtgctgaatgaaaagaaacgcttcggaaagattgtgtgtttccgtgat
ttgaaaagcaatgttgataccgctatcaaattgttcagcaacagtaacaatccggaagaa
atagtgcgacctccgtttgaagaagtcaaacaggaatacaaggagcttgctaccaatttt
ttgaagaaatatccggacacaaattgtatagaccttttgcagagtgaaaaagctaagaaa
gagtttgttttggcgttccgtgatattatccgtaaacatgctgaaatacagatatacgag
gattataatgaagagtctgatgatctcggcatgacggaacagcaatttatggatttcaga
agtaagtatcttgatatccatgatacttttgcactcgttgttccagcaccgtcacccaaa
ccggatgatgatacagatgttccggatgacggagacctcggtgatgtggatttctgcctt
gaactcctacatagcgacattatcaatgtggcatatatccttgaactcattgcagaactt
gacccatatagtgccgattacgcggaacgccgccagaatatcattgacacgatgattaag
gatgctgaaatgcgcagcaaggcaaaacttattgatggcttcattcaaaagaatgtggat
gacgataaggaaaatttcatgatgcagcgaggcaaggctgacggtacaagcgatttggaa
gaacggttgaaccgctatattgctgttgaacgagaaaatgccgtcaactcattggctgag
gaagagaaaatatcgtcatcagtattgaatcatttccttaaagaatatgattatctgcaa
aaagagcagccagaaatcatacaaaaggcattgaaagagaagcatctcggattgataaag
acgagaaaggcgttgacgaggattttagacagattgcgtaatatcatacgcactttcagt
tgggattaa

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