Acidithiobacillus ferrooxidans ATCC 53993: Lferr_2546
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Entry
Lferr_2546 CDS
T00758
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lferr_2546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afe03400
]
Lferr_2546
Enzymes [BR:
afe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Lferr_2546
DNA repair and recombination proteins [BR:
afe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Lferr_2546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ACH84740
LinkDB
All DBs
Position
2512667..2516059
Genome browser
AA seq
1130 aa
AA seq
DB search
MNHPEIEPGFIVLHGDRLEWLSDAVLEWLRAHPLRPLEEEIFLVQSNGIAEWLQWTLAAH
EGICAAVRVALPGRFLWESYARVLGTGIVSARSPLDKAPLTWRLMRLLPELLAHADFAPL
RHFIGQSQRPDGALERRWQMAAQIADLFDQYQVYRGDWLADWTTDQSLLRRGDGERVTLP
ADQRWQPRLWQALRQDLHSRGLDQAPGRAQVHEQFLAALNAGRPPVTPLPRRVVIFGAAT
LPEQSLTALAALGRQMQVILAVPNPCRYHWADIVSGRELLRRERRRQPPRNGHDLSATAT
EDLHQFGNPLLAAWGRQGRDFLDLLDQFDETAALQRQMDIPRIDLFSEDQGDTLLRQLQV
QIRDLEGIRPETCTALDDNDHSVVFHIAHSALREVQILHDQLLDRFATGKLQPRDVIVMV
PEIGGFAPLIRATFDQYDREDRRYIPYHIVDLQARDEQPLLLALDWLLRLPEQRCRQSEI
RDLLNCPALRRRFGLELEDLPIVQHWLAGAGWRWGLSAEHRAALGMPHCGSQNSGDFALQ
RLCLGYASGDDSHFSGIEAYGEVGGLDAALLGPLGQLLEKLAHWQHVLGESLVPEHWGEA
ARNLLTDFFSASDDDDEALLQNLEEALRQWQTDCAAADFNEALPLAVFRGAWLEMLDAPD
LGRSFLGGGVTFCTLLPMRAVPYPLVCLLGMNEGDYPRRSPRPDFDLMALPGMARPGDRS
RRDDDRYLMLEALLAARRELYVSWAGRDQRNNHERAPSLLVAQLREAIRDGWPPALEKRT
FEHPLQPFSPDYLAGKPGLRTWAREWYPSPHSAPENAALPDPAEITPRSIRELLEFFRLP
ARAFYRQRLRTDFNEEDPAEEDDEPFTLDSLETYHLLEDLLRAAEKNGPDRIAERVRAQR
RSGRYPLAGMASRTATALLDDVTPVLTVWREIGTEWTAAPQRRVVHRARGRILLEDWLPA
LYQNNAGDLAFVQLRASRLLNKDSKKPEGDKLAALWLQQLLANAVGLRCGGIVVGRDVLV
RAAPPPPGAIAALDDLLDLWQEGLCEPLPVTLKTALVSLQGKNPAPIYDGNDRLPGEARK
DLSLFRDYPDFATLSSARTGPQRRGFAEYAAALYRPFAGWLETLEWQAHP
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatccggaaatcgaaccgggctttatcgtcctccacggcgaccgtctggagtgg
ctcagcgatgccgttctggagtggctgcgcgcgcacccgcttcggccactggaagaggaa
atcttcctcgtccagagcaacggcatcgccgagtggctgcaatggaccctggcagcccat
gagggcatctgtgccgcggtgcgcgtcgccctgccggggcgttttctctgggaaagctat
gcacgggtgctgggcaccggcatcgtctcggcccgctcgccgctggacaaggcaccgctc
acctggcgactgatgcggctcttgccggaactgctggcccatgccgatttcgcccccttg
cggcattttatcggccagtcacagcggccggacggcgcattggagcggcgctggcaaatg
gccgcgcagatcgccgatctgttcgaccagtatcaggtctatcgtggcgactggctggcg
gactggaccacggaccagtccctgctgcggcggggcgatggcgagcgggtgactctgccc
gccgaccagcgctggcaaccccggctctggcaggcgttacggcaggatctgcacagccgc
gggctggaccaggctccgggccgggcgcaggtgcatgagcaatttctcgccgccctgaat
gccgggcgcccccccgtaacgcccttgccccgccgcgtcgtcatcttcggagcagccacc
ctgccggaacagagtctgaccgcgctggcggcgctgggccggcagatgcaggtgatcctt
gcggtgcccaacccctgccgctaccactgggccgacatcgtctcggggcgcgaattgctc
agacgcgaacgacgtcgccaacccccgcgcaacggccacgatctctccgccaccgccaca
gaggacctgcatcagttcggcaatcccctgctcgccgcctggggccgtcagggccgggat
tttctcgatctgctggaccagttcgatgaaacggcggcattgcagcggcagatggacatc
ccgcgcatcgatctcttcagcgaagatcagggcgacaccctcctgcgccagttgcaggta
caaatccgcgatctggaaggtatcaggccggaaacctgcaccgcactggacgacaacgat
cactccgtggtctttcacatcgcccacagcgccctgcgcgaggtgcagatcctccacgat
caactgctggaccgctttgccactggcaaactgcagccccgcgacgtgatcgtcatggtc
ccggagatcggcggctttgcgcccctcatccgcgccactttcgatcagtatgaccgggag
gacaggcgttacattccctaccacatcgtcgatctgcaggcccgcgacgaacagcccctg
ctcctggccctggactggctgctgcggctgcccgagcagcgctgccgacagagcgaaatc
cgtgatctcctcaactgccccgccctgcgccggcgctttggtctggaactggaggacctg
cccatcgtgcaacactggctggccggagccggctggcgctgggggctctcggcagagcac
cgggccgcgctgggcatgccccattgcggttcccagaacagcggcgactttgccctgcaa
cgcctctgcctcggctatgccagcggcgacgacagccatttctccgggatcgaggcctac
ggcgaggtgggtgggttggacgccgcgctcctcggccccctcggtcaattgctggagaag
ctggcgcactggcagcacgttctgggcgaatccctggtgccggagcactggggtgaagcg
gcccgcaatctgctcacggactttttcagcgccagcgatgacgacgatgaagccctcctg
caaaatctggaagaggccctgcgccaatggcagacggattgcgcggcggcagattttaac
gaagcgctccccctcgcggtatttcgcggcgcctggctggagatgctggatgcgccggat
ctggggcgcagctttcttggcggcggagtcaccttctgcaccctcctgcccatgcgcgcg
gtgccctacccgctggtctgcctgctcggtatgaacgagggcgattacccgcggcgcagc
ccccgtccggacttcgatctcatggcgctacccggcatggcccgccccggcgaccgctcc
cgccgcgatgacgaccgttatctgatgctggaggccctcctggccgcccgtcgggaactc
tacgtcagttgggcgggaagggatcagcgcaataaccatgaacgggcgccctccctgctg
gtggcgcagttgcgggaggccattcgcgacggctggccgccggccctggaaaagcgcact
ttcgagcatcccctgcaacccttcagccccgactatctggccggcaaacccggcctgcgc
acctgggctcgcgagtggtatccctctccgcacagcgccccggaaaacgccgcgctaccc
gaccccgccgagatcaccccccgcagcatccgcgagctgctggagttttttcgcctgccc
gctcgtgccttttaccggcaacgcctgcgcacggacttcaacgaagaagatccggctgag
gaggacgacgaacccttcacgctggacagccttgagacctatcatctgcttgaagacctg
ctccgcgccgcggaaaaaaacggccctgaccggattgccgaaagggtgcgggcacaacgg
cgcagtggtcgctatcccctcgcgggcatggcgtcgaggaccgcgaccgcactgctcgac
gacgtcactcccgtcctgaccgtctggcgggagatcggcacggaatggaccgcagcgccg
caacgacgggtcgttcaccgtgcccgcggccggatattgctggaggactggctgcccgcc
ttgtaccaaaacaacgcaggagacctcgccttcgtccagctccgcgccagtcgcctgctg
aataaagacagcaaaaaacccgaaggggataaactcgcagccctctggctccagcagttg
ctcgccaacgccgtcggcctgcgctgcggtggcatcgtggtgggccgggatgtgcttgtc
cgcgccgcgccaccgccaccgggcgccattgccgcactggacgatctgctggatctctgg
caggaaggtctctgcgagcccctgccggtcaccctcaaaaccgccctcgtcagcctgcag
ggcaaaaacccggcacccatttacgacggcaatgaccgcctgcccggagaagcccggaaa
gatctcagcctgttccgcgattatcccgacttcgccaccctcagcagcgcccgaaccggg
ccgcaacgacgcggctttgcagaatacgccgcagccctctaccgccccttcgccggctgg
ctggaaactttggagtggcaggcgcatccatga
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