Acidithiobacillus ferrooxidans ATCC 53993: Lferr_2692
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Entry
Lferr_2692 CDS
T00758
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe03030
DNA replication
afe03410
Base excision repair
afe03420
Nucleotide excision repair
afe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lferr_2692
03410 Base excision repair
Lferr_2692
03420 Nucleotide excision repair
Lferr_2692
03440 Homologous recombination
Lferr_2692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afe03032
]
Lferr_2692
03400 DNA repair and recombination proteins [BR:
afe03400
]
Lferr_2692
Enzymes [BR:
afe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lferr_2692
DNA replication proteins [BR:
afe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Lferr_2692
DNA repair and recombination proteins [BR:
afe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Lferr_2692
NER (nucleotide excision repair)
GGR (global genome repair) factors
Lferr_2692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
DNA_pol_lambd_f
HHH
IMS_HHH
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ACH84885
LinkDB
All DBs
Position
complement(2679076..2681775)
Genome browser
AA seq
899 aa
AA seq
DB search
MPQDPRILVDASSFLYRAFHALPDLRAPDNLPTGAIYGVANMLRRLLKEHPSDEIIVIFD
APGGTFRDRLYPEYKAHRPAMPEELRVQVPLLHDWIRATGLPLVIEPDVEADDVIGTLAR
EAAPDQQVLIVTGDKDMAQLVNSRVRLIDTMKGIETDAAGVEERFGVPPERIADLLALIG
DKVDNIPGVPGVGPKTAARWLTQYGDLDGVLAHAGDIGGKVGEALRASAHYLPLSRDLAT
IRCDLTLPVATYARRAADVVALRALAQRLGFQAWLRDLPAGDAGKVPEKRSSDIDRAAYR
AITTAEALDVLLLALKAADVVALDTETTSLDPLHADLVGISCAWQAGGDYQAVYVPVGHR
DAGPQLDRQTVLTALRPWLEDPQAAKLAQNAKYDWRVFWRHGIHPAGLARDTLLESYVLN
SSHNGHDLDTLAERYLQHQNIRYEEVVGKGKSARNFADVPVAEALPYAAEDADVCLRVDA
LLWPRFASEPGLRRVLMEIEMPLVLVLARMEEAGVKIDRAQLEVLSTELSRDMADCEQKA
FVLAGQSFNLNSPKQIQEILFDKMRLPVLKKTPGGQPSTNEDVLAQLAVHADLPRLILDY
RGMAKLKNTYADALPQMINPDTGRVHTHFQQAVAATGRLSSNDPNLQNIPVRTEQGRRIR
QAFVAEEGHWLLSADYSQIELRILAHLSGDARLLQAFAEGEDIHAVTAAEVFDLAPEDVD
SAARRAAKAINFGLIYGQTPYGLAQQLGIDQAAARQYMDRYFERYLGVLEYMAQTRALAK
KQGYVETLFGRRLYVPEIRSSNPARRTYAERAAINAPMQGTAADLIKMAMIAVDAWLQER
PERGRMILQVHDELILEVPEAGLEAAKSALKARMEGVAELAVPLLVGLGIGKHWDEAHG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgccccaagatccccgtatcctcgtcgatgcctccagtttcctctatcgtgcctttcac
gcgctgcctgacttgcgcgccccggacaatcttccgaccggagccatttacggcgtcgcc
aacatgctccgccgcctgctgaaggagcatccgagtgacgaaatcatcgtcatattcgac
gcccccggcgggacatttcgggacagactttatcctgagtataaggcacaccggccggcc
atgccggaggagctacgagtccaggttccgctgctgcacgactggatcagggccaccggc
ctgccgctcgtgatcgagcccgatgtggaggcggatgacgtgatcggcaccctggcccgg
gaggcggcgcccgaccagcaggtgcttatcgtcaccggcgacaaggacatggcccaattg
gtgaactcgcgggtgcggcttatcgataccatgaaaggtatcgaaacggatgcggccggg
gttgaggagcgctttggtgtaccgccggagcgtattgccgacctgctggcgttgatcggc
gacaaggtggacaacattcccggcgtgcccggggtcggaccgaaaacggctgcccggtgg
ctgacgcaatatggcgatctggacggtgtgctggcccacgccggcgatatcggcggcaag
gtgggtgaggcgctgcgtgcctccgcacattatctgcctttgagccgcgatctggcgacc
attcgctgtgatctgacgctgcctgtcgcgacgtacgcccgccgggcggcggatgtggtc
gccttgcgggcgttggcgcagcgcctgggttttcaggcctggctcagggacctgcctgcg
ggcgatgcggggaaagtgccggaaaagcggagcagtgatatagatcgcgccgcctaccgg
gccatcaccactgcggaagcgctggatgtgctgctgcttgccctgaaagcggccgatgtg
gtcgctttggatacggaaaccacgagcctcgatccgctgcatgccgatctggtgggaatt
tcctgtgcctggcaggccggtggcgactatcaggctgtctacgttcccgttggccaccgc
gacgctggtccgcaactggatcgacagacagtcctcaccgccttgcgcccgtggttggaa
gacccgcaggccgccaagctggcccagaacgctaaatacgattggcgggttttctggcga
catggcatccaccccgccggcctggcccgcgacacgttgctggaaagctacgtcttaaac
agcagtcacaatggtcacgatctggataccctcgccgagcgctacttgcaacatcagaat
atccgctacgaagaggtggtcggcaaaggcaagtcagcgcgtaatttcgccgatgtgccg
gtagcggaggcgctgccctacgcggcagaggatgccgatgtctgtctgcgtgtggacgcg
ctgctctggccgcggttcgccagcgagccgggcttgcggcgcgtgttgatggaaatagag
atgccgctggtgctggtgctggcgcgtatggaagaagcgggcgtcaaaatcgatcgtgcc
cagctcgaagtgctgagcacggaactgagtagagacatggcggactgtgaacagaaggcc
tttgttctggcggggcagtccttcaacctcaactccccaaagcagattcaggaaattctc
ttcgacaagatgcggttgccggtactcaagaaaacccccggcggtcagccgtcgaccaat
gaagatgtgctcgcccagctcgctgttcatgccgatctgccgcgcctgattctggattat
cgtggcatggccaagctcaagaacacctatgcggatgcactgccgcagatgatcaatccc
gacaccggccgggtccatacccattttcagcaggcggtcgcggccaccggacgcctttcc
tccaacgatccgaacctgcaaaatatcccggtgcgtaccgaacagggtcggcgtatccgc
caggcttttgtcgccgaggaggggcactggctgctgagcgccgattactcacagatcgaa
ctgcgtatcctggcccatctctccggggatgcacgcctgttgcaagcctttgcggagggc
gaggacattcatgcggttaccgctgccgaggtctttgatctggctccggaagatgtggac
agtgccgcacgtcgtgccgccaaggctatcaacttcggtctgatttatgggcagacgccc
tacggccttgcgcaacagttgggcattgatcaggcggccgcgcggcaatacatggaccgt
tacttcgagcgctatctgggtgttctcgaatatatggcgcagacccgtgccctggcgaaa
aagcagggctatgtggagacactctttggccgtcgcctgtatgtaccggagattcgctcc
agcaacccggctcggcgtacttatgccgagcgtgccgccattaacgcacctatgcagggc
actgcggcggatctcatcaagatggcgatgattgccgtggatgcctggttgcaggaacgg
cccgagcgtggtcggatgattctccaggtacatgacgaactgattctggaggtgccggag
gccggcctggaggctgcgaagtcggcactaaaggcgcgtatggagggggtagcggaactg
gcggtgccgctcctcgtggggttgggtatcggcaagcactgggatgaagcgcatggctga
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