Acidithiobacillus ferrivorans: Acife_2903
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Entry
Acife_2903 CDS
T01595
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
afi
Acidithiobacillus ferrivorans
Pathway
afi02020
Two-component system
afi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Acife_2903
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Acife_2903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afi03021
]
Acife_2903
Transcription machinery [BR:
afi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Acife_2903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AEM48977
UniProt:
G0JT71
LinkDB
All DBs
Position
complement(2864157..2865584)
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AA seq
475 aa
AA seq
DB search
MKQGLELKLGQHLAMTPQLQQAIRLLQLSTVDLQQEVQSMLESNPLLDEDAGDEEGGGGP
TPETVATPSEDRQLDLAAEDTLPDELPLDSQWDDVFDMGTSGSGGGSDDDMPDFESRSSH
SQSLQDYLRWQADMTHFSTDERNIAELIIDAIDERGYLAESLEDLAVNMNVGDDALSAVL
LRVQDFDPPGVGARDLSECLLLQLKQMVEEDASILLAQRIVKDHLQALGRHDYPRLCATL
GVDEETLRGAMTLISALNPKPGEEVGAESTEYVIPDVIVRWVGKRLRVDLNPDAMPKLRI
NGRYAGMAGGKDAAHKYIQDQLNEARWFIKSLQSRQETILKVARAIVERQKDFFTNGPES
MRPMVLRHIAEAVEMHESTVSRVTNQKYMITPRGLYEFKYFFSSHVSTDSGGSASATAIR
ALLIKMTQAESARHPLSDAEIAKVLADQGIQIARRTVAKYREAANIPTASQRRRL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaggtttagaactcaagctcggccagcatctggccatgaccccgcagttgcaa
caggcgatccgtctgctacagctgtctacggttgatctgcagcaggaagttcaaagcatg
ctggagagcaacccgctgcttgatgaggatgctggggatgaagaaggtggcggcgggccg
actccggagacggttgcgacgccttccgaagaccgtcagctggatctggccgcggaggat
acgctgccggatgaattgcctttagatagccagtgggacgatgtttttgacatgggaacg
tcaggttctggcggtggttctgacgacgatatgccggattttgaatcgcgcagcagtcac
agccagagtttgcaggactatctccgctggcaggctgatatgacgcacttcagtacggac
gagcgcaatatagcggagttgatcattgacgctattgatgagcgcggttatctggcggaa
agcctggaagatctcgctgtcaatatgaatgtgggggacgatgcgttgtcggcggtattg
ctgcgcgtgcaggacttcgacccgccgggtgtgggtgcccgtgatctcagtgagtgtctc
ctgttgcaactgaagcagatggttgaggaggatgcgtctatattgctggcgcaacgcatt
gtgaaggaccacttgcaggccctcgggcgccacgattacccacgcttgtgtgccacgctg
ggggtggatgaggagacgctgcgtggggcgatgacgctgatttccgcactgaatcctaaa
ccgggtgaagaggtgggtgctgagagtaccgagtacgtcatccccgatgtgatcgtgcgc
tgggtgggtaagcgtctgcgcgtcgatctgaatcccgacgcgatgcctaaattacgtatc
aacggtcgttatgcgggcatggcgggcggaaaagatgcagcgcataaatatattcaggat
cagctcaacgaggcgcgctggttcatcaagagcctgcaaagccgtcaggaaaccatattg
aaagtggcgcgggctattgtcgaaaggcagaaggacttttttaccaatgggccggaatcc
atgcggcccatggtcctgcggcatattgccgaagcagtggaaatgcacgaatcgacggta
tcgcgggtcaccaatcagaaatatatgattacaccccgtggtctttatgaatttaaatac
tttttctccagtcatgtgagtaccgacagcggcggttccgcgtcggccaccgctattcgg
gcgttactgatcaagatgacgcaggcggaaagcgcacggcatccgctgagtgatgcggaa
atcgccaaggtgctggctgatcagggtattcagattgcgcggaggacggtggccaagtac
cgcgaggcggccaatattcctactgcgagccagcggcgacgtttgtga
DBGET
integrated database retrieval system
