Acidithiobacillus ferridurans: AFERRID_12040
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Entry
AFERRID_12040 CDS
T05847
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
afj
Acidithiobacillus ferridurans
Pathway
afj00470
D-Amino acid metabolism
afj00550
Peptidoglycan biosynthesis
afj01100
Metabolic pathways
afj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AFERRID_12040
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFERRID_12040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AFERRID_12040
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afj01011
]
AFERRID_12040
Enzymes [BR:
afj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AFERRID_12040
Peptidoglycan biosynthesis and degradation proteins [BR:
afj01011
]
Precursor biosynthesis
Amino acid ligase
AFERRID_12040
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
TTL
ATP-grasp_4
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
BBF64986
UniProt:
A0A2Z6IHW8
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All DBs
Position
1181564..1182490
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AA seq
308 aa
AA seq
DB search
MSDLARIAVLYGGPSGEREVSLDSGRAVLQALQGLGMDAVGVDIQPAILQQQMAESGAQI
AFNVCHGAVGEDGLLQACLETLDMPYTGSGVLASALAMDKWRCKQLWRAAGLPVTDGILL
HRGGHTPDLGARFGWPLYIKPNHGGSSLGVSKVCGPAELDAALQCAFAIEEEVLCEGAVI
GHEATVGVLDGQALPPIVIETPRAFYDYTAKYLADNTRYLLPSGLGAPLDQQLQALALSA
FAELGCRDWGRVDFMVDGDGRPHLLEVNSVPGMTSHSLIPMAAKATGIGFPELCAAILRT
AQRRVKYG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttggcccgcatagccgtactttatggaggtccctccggagagcgcgaagtc
tctctcgacagcggccgcgccgtgttgcaagccttgcaggggctgggtatggatgccgtc
ggcgtcgacatccagccggccatcctccagcagcaaatggccgaaagcggggcgcagatc
gccttcaacgtctgccatggcgcggtaggcgaagacggtctgttgcaggcctgcctggaa
actctggatatgccctacaccggcagcggggtcctcgcctccgcgctcgccatggataaa
tggcgctgcaagcagctctggcgagctgccgggttaccggtgaccgacggcatcctgctg
catcgcggcggccatacgcccgatctcggcgcccgcttcggctggcccctgtacatcaag
ccgaaccacggtggctccagcctcggggtcagcaaagtctgcggcccggcggaattggat
gcagccttacagtgcgccttcgccatcgaggaggaagtcctctgcgagggtgccgtcatc
ggtcacgaagccaccgtcggcgtcctcgatggccaagcgctgccgccgatcgtcatcgaa
acgccccgggccttctatgactacaccgccaagtatcttgccgacaatacccgttacctc
ctgccctccggcctcggcgcgccactggaccagcagttgcaggcgcttgcgctcagtgcc
tttgccgagctcggctgccgcgactgggggcgggtcgacttcatggtcgacggcgatggc
cgaccccatctgctggaagtcaacagtgtacccggcatgaccagccacagcctgattccc
atggccgccaaagccaccggcataggtttcccggaattatgcgccgccatactgcgcacc
gcgcagaggagagtgaaatatggttag
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