Acidithiobacillus ferridurans: AFERRID_13600
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Entry
AFERRID_13600 CDS
T05847
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
afj
Acidithiobacillus ferridurans
Pathway
afj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFERRID_13600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afj03400
]
AFERRID_13600
Enzymes [BR:
afj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFERRID_13600
DNA repair and recombination proteins [BR:
afj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFERRID_13600
RecFOR pathway proteins
AFERRID_13600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
nSTAND3
Mg_chelatase
AAA_22
AAA_16
AAA_3
RNA_helicase
TsaE
AAA_18
AAA_2
DUF815
IstB_IS21
NTPase_1
NACHT
AAA_14
AAA_17
AAA_28
AAA_33
AAA_19
ABC_tran
NB-ARC
AAA_24
AAA_25
Rad17
Sigma54_activ_2
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
BBF65142
UniProt:
A0A2Z6IHZ4
LinkDB
All DBs
Position
complement(1308481..1309503)
Genome browser
AA seq
340 aa
AA seq
DB search
MDRGPLNPQEDHNDAVDHALRPRRLAEYLGQAKLRESLGLYIDAARGRSEALDHVLLFGP
PGLGKTTLAHIIAQEMGAGLKVTSGPVLDKPGDLAAILTNLQPHDVLFVDEIHRLSPVVE
EILYPALEDYELDILIGEGPAARSIKISLPPFTLIGATTRAGLLTSPLRDRFGISFHLEF
YSDAELTQIVTRSARILGTPQALEGAQEIARRARGTPRIANRLLRRVRDYAQVRGNGEID
MATAQAALTLMEVDQHGFDGQDRKLLQAVISRFAGGPVGVESLAAAIGEERGTIEDVLEP
FLIQRGYLIRTPRGRCATELSYLALGLTAPKEPKGIFDAG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggatagaggccctctcaacccccaggaagaccacaatgatgcagtagaccatgccctg
cggccgcgccggctggcggagtacctcgggcaggccaagctgcgggagtctctgggcctg
tatatcgatgccgccagggggcgcagtgaggcgctggatcatgtgctgctcttcgggccg
cccggactcggcaaaaccaccctggcgcatatcatcgcccaggagatgggcgcgggcctc
aaagtcacctccggcccggtgctcgacaagcccggcgacctggccgccatcctcaccaac
ctgcaaccccacgacgtacttttcgtcgacgagattcaccgtctcagcccggtggtggaa
gaaatcctctaccccgcgctggaggactacgagctggacatcctcatcggcgaagggccg
gcggcacgctccatcaaaatcagcctgccacccttcaccctgatcggcgctaccacccgc
gccggcctgttgacctcgccgctgcgcgaccgcttcggcatcagttttcacctggaattc
tacagcgacgccgagctgacccagatcgtcactcgctccgcccggattctcggcaccccc
caggccctggaaggcgcgcaggaaatcgcccggcgcgcgcgcggcacgccgcgcatcgcc
aaccgcctgctgcgtcgggtacgggactacgctcaggtacggggtaacggcgaaattgac
atggcgacggcacaggcggccctgaccctcatggaggtggaccagcatggcttcgatggc
caggaccgcaagttgctccaggccgtcatctcccgtttcgccggcggaccggtgggggtg
gagagtctggcggccgccatcggcgaggagcgcggcaccatcgaagatgtgctggagccc
ttcctgatccagcgcggttatctgatccgcacgccgcgcgggcgctgcgccactgaactc
agctatctggccctgggcctgacggcccccaaggagcccaaggggattttcgatgctggc
taa
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