Acidimicrobium ferrooxidans: Afer_1337
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Entry
Afer_1337 CDS
T00956
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Afer_1337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afo03400
]
Afer_1337
Enzymes [BR:
afo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Afer_1337
DNA repair and recombination proteins [BR:
afo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Afer_1337
Prokaryotic type
Afer_1337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
MarR_2
HHH
TrmB
DUF5825
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ACU54263
UniProt:
C7LZV5
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All DBs
Position
complement(1392480..1393364)
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AA seq
294 aa
AA seq
DB search
MVGVPGDSLDESRLEALRRDLGQVDLRPLPWRARPCDPWHVLVAETMLVQTQVARVEETF
VAFIERFPTPRALADGGLVAALESWGRLGYYRRAERLWRAAVVIVETWAGACPVGEDALR
ALPGVGRYVARAVAVQCGGLAALPIDTNARRVLVRALLGAPASDSILEQVGCELVNGCDA
DRLTQAVFDVGALRCRAAPQCDACELRRSCRTHREGLTDPWVSRHRQGPYVGSLREARAR
VLRALLAGPQSLRDLERHSGVDDHRLEAALRGLRADGLVETDGQERWWVPERPR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtggttggtgtgcctggagacagcctcgacgagtcacggctcgaagccctgcgtcgggac
ctcgggcaggtcgacctgcgcccgctgccctggcgggcgcgaccgtgcgatccgtggcac
gtcttggttgcggagaccatgttggtgcagacccaagttgcgagggtcgaagagaccttc
gtcgccttcatcgagcgcttcccgacgccacgcgcgcttgcagacggcggactcgtcgct
gcgctcgagtcgtggggacgacttggctactaccggcgggccgagcgcctgtggcgcgcc
gccgtggtgatcgtggagacgtgggccggcgcctgccccgtcggagaggacgcgctgcgg
gcgttgcctggggtggggcgctacgtcgcccgcgccgttgcggttcagtgcggtgggctc
gccgctctcccgatcgacacgaacgcgcgtcgggtcctggtgcgcgcgctcctcggcgcg
cccgcatccgactcgatcctcgagcaggtcgggtgcgagctggtgaacggatgcgacgcc
gatcggctgacgcaggcagtcttcgacgtcggcgcgttgcggtgccgagcggcgccacag
tgcgatgcgtgcgagctacgccggtcgtgtcgaacccaccgagagggactcactgatccg
tgggtgtcgcggcatcggcagggtccgtatgtcggttcgcttcgtgaggcccgggcccgt
gtcctgcgagcactcctcgccggtccccagagcctgcgcgacctcgagcgacactcgggt
gtcgacgaccatcgcctcgaagcggcgctgcgagggctgcgtgccgatggcctcgtcgag
accgacggacaggaacggtggtgggtcccggagcgacctcgctga
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