Acidimicrobium ferrooxidans: Afer_1971
Help
Entry
Afer_1971 CDS
T00956
Name
(GenBank) glycosyl transferase family 2
Organism
afo
Acidimicrobium ferrooxidans
Brite
Lipopolysaccharide biosynthesis proteins [BR:
afo01005
]
O-antigen repeat unit
Afer_1971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Methyltransf_24
Glyco_tranf_2_3
Glyco_transf_21
CALCOCO1
Glyco_trans_2_3
Glyco_tranf_2_2
Glyco_tranf_2_5
Lant_dehydr_C
PIK3CG_ABD
ABC_tran_CTD
DASH_Spc19
Motif
Other DBs
NCBI-ProteinID:
ACU54875
UniProt:
C7M1X8
LinkDB
All DBs
Position
2071341..2074595
Genome browser
AA seq
1084 aa
AA seq
DB search
MPSLLRFPVGQAVFQLPERLTEVNSWHGHIPFAFWIVEALEPSVFVELGVHRGDSYFAFC
QAVKSLGLDTRCYGVDTWKGDAHAGFYGEEIYEDFSAYNREHYQDFSKPLRTTFAEAIEQ
FEDGSIDLLHVDGYHTYEAVRSDFGCWLPKLSERAVVLFHDIAVTDRGFGVWRFWEEIAA
QYPSFGFMHSFGLGVLGVGKELPDSLASFFEDAKANPEILHSFYEALGTRCQLFGDLQRA
RDELANTTAAPAISEEVATLRQQVLDLTYRYERALERKEAEAEQLEAKVVDLEARLGQSS
HSAAALAEHLASVTAQRDEILQSETWKLTAPARGFLWWMRRVANWRRFTQTFRVTLQPLQ
GVGESLFETDSFVALGGRMRFAIEGAPRPPGWYELTCTVTTTSDLSKMRPYIITETQDHQ
RYSQQIPGKVDPEGQIRVLFHVNKQAARHELLLVGLNGITSISAPRVKPALHLGEPMARI
LAAAIVPTIAYADLPPIAAHQELLPQEDEFSRWIERNERINQDDRERVARELATWEHPPL
ISVLMPVYNTPIRHLVTAIESVRAQWYPHWELCIADDASTDPEIRPILTRYQEADPRIKV
AFRDENGGISANSNTALTLANGKFVAYLDADDEISEVALLHYAREIHEYPGVELLFCDED
KITEDGDRSDPYFKPSLSPALLLGKNCVTHLGVYRTDTVRRLGGMRSEFDGSQDWDLALR
FLPIVGIDFTRARRIPRLLYHWRRIHGSTATTLRSKSWAVLAGRHAVQDYLDTAVPGAKA
EPIPRASNLNRLVLPTPDPAPLVSILLPTAGNYQLLRGCLSSLLERTDYPRFEVLITIDS
DNPDADSLAYLDTLEHTGKVRVIRRRRPPGETFNYSRIVNNLARYAAADLLLLLNDDTEV
INAGWLTEMVAVLSLPDVGVVGAHLYYADGSIQHAGVMTGHHRALHLYSGLPGASWGYYA
DLLLARNVSAVTGACLLTSRRVWDEVGGLDEQLAVSFNDVAYCRAAGALGYQIIVTPHAR
LKHFESVTRGFDDLTLPRRSRLASEFQRLATLFPDIAAADPFYNPNLVPEGQFRLQYESP
IPVV
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtctcctgcgcttccccgtcggtcaggcggtttttcagcttccagaacggctt
accgaggtcaactcatggcacgggcacatccccttcgccttctggatcgtcgaagcactc
gagccgtcggtcttcgtcgagctcggtgtccaccgcggggactcctacttcgccttctgc
caggccgtcaagtctctcggacttgacaccaggtgctacggcgtggacacctggaagggc
gacgctcacgccgggttctatggggaagagatctacgaagacttctctgcgtacaaccgc
gagcactatcaagacttctcaaagccattacgcaccacatttgccgaggctatcgagcag
ttcgaggacggcagcatcgaccttctccacgtggacggctaccacacctacgaggctgtc
aggtcggactttggatgctggctccccaaactgagtgagcgggccgtcgtgctcttccat
gacatcgcagtcaccgaccgggggtttggcgtctggcgcttctgggaggagatcgctgcg
cagtacccttccttcggcttcatgcattcctttggtctcggagtgctcggcgtcggcaag
gagctgccagacagcctagctagcttcttcgaagacgccaaagcgaaccctgagatcctg
cactccttctatgaggcgcttggaacgagatgccaactcttcggcgatctccagcgcgct
cgagatgagcttgcgaataccactgcagccccagctatttccgaggaagtagccaccttg
cgccaacaagtactcgacctcacctaccgctacgaacgagcgctcgagcgtaaggaggcg
gaggccgaacagttagaagccaaggtggtagacctcgaggcacgccttggccagtcgtcg
cactcggccgcagccctcgcagaacaccttgcgtcagtcacggctcaacgcgacgagatc
ctccaatcggagacctggaaactcaccgctcccgctcgcggcttcctctggtggatgcgt
cgagtggcgaactggagacgcttcacacagacgttccgtgtcacactgcagccccttcag
ggtgttggcgagtcactcttcgagaccgacagcttcgtggctctcggtggcagaatgcgc
tttgcaatcgaaggcgcacctcggcctcccgggtggtacgagctgacttgcacggtcacc
accacctccgacctctcgaaaatgcgcccctacatcatcaccgagacacaagaccaccaa
cgctacagccaacagattccaggcaaggtcgacccagagggccagatccgagtcctgttc
cacgtcaacaagcaagctgctcgccacgagctgctgctcgtgggcctcaacgggatcacc
tccatttccgcaccacgcgtcaagccagcgctgcaccttggcgagccgatggctcgcata
cttgccgccgcgattgttcccacaatcgcgtacgcagacctgccacccatcgcagctcat
caagagctcctcccgcaggaggacgagttctcccgctggatcgaacgcaacgagcggatc
aatcaagacgaccgagagcgcgtcgcccgagagctcgccacctgggaacacccaccactg
atctccgtactcatgcccgtctacaacacgccaatacggcacctcgtaaccgcgatcgag
tcggtacgggcgcagtggtatccccactgggaactgtgcatcgccgacgatgcttcaacc
gatccagagattcggccgatccttacccgctatcaggaggcggatccccgcatcaaggtc
gccttccgagacgagaatggcggtatctcggcaaactcgaatactgcactcacgctcgcg
aacggcaagtttgttgcatatctggatgccgacgacgaaatctccgaagtcgcactcctc
cactacgctcgagagattcatgagtatcctggagtcgagttgctcttctgcgacgaagac
aagatcactgaagatggtgatcgctccgacccctacttcaagccgagcctctcccccgcg
ctccttctcgggaagaactgcgtcactcacctcggcgtctatcggaccgacaccgtccgc
cgcctcggcggaatgcgctcagagtttgacggatcccaggactgggacctagcactacgc
tttcttccgatcgtcggtatagacttcacgcgcgcacgtcgcatcccgcggctgctctat
cattggcggcggatccatggctcgacggcaaccacactccgatcgaagagctgggccgtt
ctggcggggcggcatgccgtgcaagactacttggatacagcagtgccaggtgcgaaggct
gagcccattccgcgcgcctccaatctcaaccgactcgttctcccgactccggatccagct
ccattagtttcgattcttctgcctaccgcgggaaactatcagctacttcgcggctgcctc
agctcgctcctcgaacgcaccgactacccccgcttcgaagtgcttatcacgatcgactcc
gacaaccccgacgcggactcgctcgcataccttgacacccttgagcacaccggaaaggtc
cgggtgatccggcgtcggcgcccgcctggcgaaacctttaactactcccggatagtcaac
aacctcgctcgctacgcagcagctgacctcctcctgctcctcaacgacgacaccgaggtc
atcaacgctggttggctcaccgagatggtcgcggtactatcgctgcccgacgtgggcgtc
gttggcgcgcacctctactacgccgacggcagtatccagcacgcgggggtgatgactgga
caccacagggcgctacatctttacagcgggctgccgggcgcaagctggggatactatgca
gacttactactcgcgcgcaacgtgagtgcggtcactggtgcttgtctcctgacctcgcgt
cgagtctgggacgaggtcggtgggttggacgagcagcttgcggtcagtttcaacgacgtc
gcctactgccgcgcagcgggcgcactgggatatcagatcatcgtcaccccgcatgccagg
ctcaagcatttcgagtcagtgacccgaggcttcgacgacttgacgttgccccgcaggtca
cggctcgcatcagaatttcagcgactcgccacactgttccccgacattgccgcagctgac
ccgttctacaaccccaacctcgtccccgaagggcaatttcggcttcagtatgaatcgccg
ataccggtggtctaa
DBGET
integrated database retrieval system
