Acidithiobacillus ferrooxidans ATCC 23270: AFE_0853
Help
Entry
AFE_0853 CDS
T00810
Symbol
uvrC
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFE_0853 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_0853 (uvrC)
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFE_0853 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH_2
GIY_YIG_2
Pox_polyA_pol_N
Motif
Other DBs
NCBI-ProteinID:
ACK80219
UniProt:
B7J6R8
LinkDB
All DBs
Position
778958..780784
Genome browser
AA seq
608 aa
AA seq
DB search
MDRAFVPGEFLRTLTSQPGIYQMFGQGSRLLYVGKARNLRRRVSSYFQKQRHTPKTLAML
AQVTRVEVVVTHTETEALVLEANLIKRHHPPYNILLRDDKSYPYLFIETGHGTPRMSLHR
GAQKGKGHYFGPYPAVTALRESMVLLQKAFRLRTCEDHTFHHRSRACLQFQIRRCSGPCV
GHISGEDYARDVADTIRFLEGKSDEAIRSLGERMQAAAEQLDFEEAARRRDQIAALSKIQ
ERQYVAQAGGGDFDVLAAAQENGQWVVYVSFIRNGRQLGGRSVFPRHTEEVRAPDVLAAF
LMQFYSDKEVPGNLLVNVLPRSPTSLAEALGSEAGHRVMIDQPQRGPRKRWMALALTNAM
GALRQRTQTAGAGRRRMLLLQELFQLPEIPQRVECFDISHTRGEVAVASCVVFGDDGALK
NEYRRFNIRDIRGGDDYAAMEQAVHRRYGRLQKEGLALPEIVFIDGGAGQVARAQAALDA
LEIGCIQLCGVAKGTTRRPGLEMLHIPGWAVPRQLDDDDPALLVIQEIRDEAHRFAITGH
RARRGKARQESDLDGISGIGPKRRVALLRAFGGLRGIRDAGMEDLQRVEGIHLELAQRIY
DFFHVGRA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggacagagccttcgttcccggagagtttctgcggacgttgaccagccagcccggtatt
tatcagatgttcggccagggcagtcgcctgctctatgtgggtaaagcccgcaatctccgg
cgccgcgtgagctcctattttcagaagcagcgccatacgccaaaaacgctggcgatgttg
gcgcaggtaacgcgggtggaggtggtggtcacccacacagagacggaagcgctggtgctg
gaggcgaatctgatcaagcgccaccacccgccttacaatatcctgctgcgcgatgacaag
agttacccctatctgttcatagaaaccggtcatggcacgccgcgcatgagtttgcaccgg
ggggcgcagaagggcaaagggcactacttcggtccgtatccggccgttactgcgttacgc
gagagtatggtgctattacagaaagcctttcgattgcggacctgtgaggatcatactttt
caccaccgcagccgggcttgtttgcagttccagattcgtcgttgcagcggcccttgtgtt
gggcatatcagcggggaggattacgcgcgggatgtggcggacacgattcgctttctggaa
ggaaagagcgacgaagcgattcgcagtctgggggagcgtatgcaagcggcggctgagcaa
ctggatttcgaggaggcagcgcgacgccgtgaccagatcgccgcgttgtccaagattcag
gagcgtcagtacgtggcgcaggcgggtggcggcgattttgatgtgctggcggcagcacaa
gagaatggacagtgggtggtgtacgtcagttttatccgcaatggacggcagttgggtggg
cgctccgtttttccgcggcataccgaagaagtgcgtgcgccggacgtgctcgctgccttt
ctcatgcagttctacagcgataaagaggtgccggggaatctgctggtcaatgtgctgccg
cgttcaccgacctccctggcggaggcgctgggcagcgaagccgggcacagggtcatgatc
gatcagccccagcgcggtccacgcaagcgctggatggcgttagcgctgaccaacgccatg
ggggcgttgcgccagaggacgcagacggccggcgcgggacggcggcgcatgctcctgttg
caggagctctttcaactcccggagataccgcagcgagtagagtgttttgacatcagtcat
acccgaggcgaggtggctgtggcatcttgtgtggttttcggtgacgatggggcactgaag
aacgaataccgccgcttcaatattcgcgatatccggggcggcgacgattacgcggctatg
gagcaggccgtccatcgccgctatgggcggctgcagaaagagggcctggccttgccggag
atcgtcttcattgacggtggtgccggacaggtggctcgtgcgcaggcggctctggacgca
ttggagatcggttgcatccagttgtgcggggtggcgaaggggacgacgcggcgcccaggg
ctggagatgctgcatatccccgggtgggcggtcccgcggcaattggacgacgatgatccg
gcactgctggtaattcaggaaatccgcgatgaagcccatcgttttgccattaccggtcac
cgcgcgcgccgcggcaaagcacggcaggaatccgatctggatggcatctccgggatcggg
ccgaaacggcgggtggcgttgttacgcgcatttggcggcttacgcggtattcgtgacgcc
ggtatggaggatttgcagcgcgttgagggtatccatctggagctcgcgcagcggatatat
gatttctttcacgtaggacgtgcctga
DBGET
integrated database retrieval system
