KEGG   Acidithiobacillus ferrooxidans ATCC 23270: AFE_1433
Entry
AFE_1433          CDS       T00810                                 
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
afr  Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:afr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AFE_1433 (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afr03019]
    AFE_1433 (rhlE)
Enzymes [BR:afr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     AFE_1433 (rhlE)
Messenger RNA biogenesis [BR:afr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AFE_1433 (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_22 P-loop_SecA ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: ACK80627
UniProt: B7J9N0
LinkDB
Position
1235720..1236976
AA seq 418 aa
MSSFESLGLSEPIWRAAAERGYTSPTPIQEQAIPVVMSGVDLLAGAQTGTGKTAAFAMPI
LHKLAVTAGSASRAPSSVRALILVPTRELAAQVEASVQLYGRYLPLRSLVLIGGVKINPQ
MQKLRRSVDILVATPGRLLDHIQQRSVDLSHVEILVLDEADRMLDMGFIRDIRRILAVLP
KKRQNLLFSATFSPEIRGLADGLLNNPTSVEVAARNATADNVAQRVFAVDQDRKRELLSH
LIEEHQWGQVLVFTRTKHGADRLARHLSQDGMQAMAIHGDKSQGARTRALAEFKEGKVQV
LVATDIAARGIDISELPHVVNFELPHVPEDYVHRIGRTGRAGNNGQAVSLVSSEERKQLQ
DVEKLLRRSFDREIVIGFEPRQSFSGHAPSAAARRPAQAAGRGRPGSGAVPSGRARRA
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtcgtcttttgaatctctgggcctttctgagcctatctggcgtgcggctgccgaacgt
ggctacaccagtcccacccctattcaggaacaggccatcccggtagtcatgtccggtgtc
gatctgctggcgggtgcacagacgggtaccggcaagactgccgcgtttgccatgcccatc
ctgcacaaactggcggttaccgcaggtagtgcgtcacgcgctccttccagtgtgcgtgcg
ctgattctggtccccacccgcgaactggcggcgcaggtggaggcgagcgtgcagttgtac
gggcgctatcttcccctgcgctccctggtgctcatcggtggggtcaagatcaatccccag
atgcagaaactgcgccgcagcgtagatatcctggtagccacccccggtcgcctgctggat
catatccagcagcgcagtgtcgacctctctcacgtcgaaattctggtgctcgacgaagcc
gatcgcatgctcgacatgggctttatccgtgacatccggcgcatccttgcggtattgccg
aaaaagcgccagaacctgctgttctcggcgacgttttcgccggaaatccgtgggctggcc
gatggcctgttgaacaacccgaccagtgttgaggtcgcggcacgcaatgccactgccgat
aatgtcgcccagcgggtttttgccgtcgatcaggaccgcaaacgcgagcttctttcccat
ctgatcgaagaacatcaatgggggcaggtgctggttttcactcgtaccaagcatggtgcc
gaccgccttgccaggcacttatcgcaggatggcatgcaggcgatggcaatccacggcgat
aagagccagggcgcccgtacccgcgccctggcggagttcaaggaaggcaaagtgcaggtc
ctggtggcgacggatatcgccgctcgcggtatcgacatcagcgagctgccccacgtggtg
aactttgaacttcctcatgtgccggaagattatgtccatcgtatcggacggaccggtcgc
gccggtaacaacggccaggccgtatcgctggtgagcagcgaggagcgtaagcagttacag
gacgtggagaagctcctgcggcgctccttcgaccgggagatcgtcatcggtttcgagccg
cggcagtctttctccggtcatgcaccgtcagcggcggcgcgtcgtccagctcaggccgca
gggcgaggtcggcccggttcaggagcggtgccttcgggtcgtgcccgccgcgcctga

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