Actinoplanes friuliensis: AFR_41810
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Entry
AFR_41810 CDS
T02892
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
afs
Actinoplanes friuliensis
Pathway
afs03030
DNA replication
afs03430
Mismatch repair
afs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFR_41810
03430 Mismatch repair
AFR_41810
03440 Homologous recombination
AFR_41810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afs03032
]
AFR_41810
03400 DNA repair and recombination proteins [BR:
afs03400
]
AFR_41810
Enzymes [BR:
afs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFR_41810
DNA replication proteins [BR:
afs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFR_41810
DNA repair and recombination proteins [BR:
afs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFR_41810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_16
AAA_30
Rad17
DnaX_C
AAA_14
AAA_18
Mg_chelatase
AAA_19
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGZ46616
UniProt:
U5WFC9
LinkDB
All DBs
Position
complement(9113004..9116552)
Genome browser
AA seq
1182 aa
AA seq
DB search
MALALYRKYRPRTFAEVIGQEHVTEPLSQALRSGRLHHAYLFSGPRGCGKTSSARILARS
LNCEQGPTPEPCGVCASCKSLANDGAGSIDVIEIDAASHGGVDDARDLREKAFFAPASSR
YKIYVIDEAHMVSSAGFNALLKLVEEPPDYVKFIFATTEPEKVLGTIRSRTHHYPFRLIP
PAVLRPYLQQLTEAEGIHVDPAVFPLVVKAGAGSARDTLSVLDQLISGAGPEGVSYPRAV
TLLGVTDVALIDDMCDALAAGDGAAAYQTIDRVAEAGHDPRRFASDLLERFRDLIILQQI
PDAVTKGLIDGPADQLEQMGAQATRLGPATLSRCADIVHNGLVEMRGTTAPRLLLELITA
RMLLPGADDSSNALLQRLERMERRLTLSPGEELPPAESGPQAAPISAAPAGGGGISAASA
GGGGISAARAAAAAAAAGRRAPAGGSAAQSGLTAQSGSGDAAAAPSAPAEAVTGSGSGSG
QPEAAGVASPGSVTAETTAARPVSGGGAGGLASAAGPVSAVPDPSAGSAGSVSALPGAGE
ASVQSAAPVSAMPGSASPVSSAPFAPASAPPAAPESYPGAAGAVSAPPENGVRRAEPAGV
MPDAPFEPGLETAVPGQLTAASIREVWPEIMVAVGRKSKKIAALAQGATVRDLEGQTVVL
TFRFPAHAKMVAAEPALLSDALYEALGGRWQIRCDVAGDSGPSPGSTSRAGTASRAPQPS
PASGPAASASGIPQPSAPASAPGGTASASAPGGTAPASAPGGTAPASAAGGTAPASAPGG
TAQASAPGGTAPASAPGGAASASAAGGTAQASAPGGTAPASAPGTRPASGVPSAPVSGYP
DEGLTGSPEAGASGSALGAPYGGAADPASSAAHGMPASPASGSSGPSAGAGGSFGAGAGS
GRGGASSPAQRAPQGGALSPAQRDSQDRQGARSSGGRQSATAPSASAAGDDGDGWPEPAR
PGGLATAVVTPPVVEEEEAWPETARPGGVAPRDSDPSVGQSSPVTTPDLTGPAGGRGFGG
PATPAPASAQQAPTAPAPTTPAPTAPARTAPAPTPPAAPPAAPATAPPAAGGRRTSSGLA
AARAAAAGAGRGTNAAAPAKTGAWSDGSPTEEAPYDPEYDGPVRPGNGSAPAAKGGQKFD
GFDPGDEPLDDVIDEKTARQSSEQQAVQLLRDALGAEKISES
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtggcactagccctctaccgcaagtaccggccgcggaccttcgccgaggtcatcgggcag
gagcacgtcaccgagccgctgtcgcaggcgctgcgcagtggccggctccaccatgcctat
ctcttctccgggccccgcggctgtggcaagacatccagcgcacggatcctcgcccgctcg
ctcaactgtgagcagggtcccacgcccgagccctgcggggtctgcgcgtcgtgcaaatca
ctcgccaacgacggcgccgggtcgatcgacgtcatcgagatcgacgcggccagccacggc
ggtgtcgacgacgcccgtgacctgcgcgaaaaggcgttcttcgcccccgccagcagccgc
tacaagatctacgtcatcgacgaggcgcacatggtctcgtcggccggcttcaacgcgctg
ctcaaactcgtcgaagagcccccggactacgtcaagttcatcttcgcgaccaccgagccc
gagaaggtcctcgggacgatccggtcgcggacgcatcactacccgttccggctgatcccg
ccggcggtgctccggccgtacctgcagcagctcaccgaggccgagggcatccacgtcgac
ccggcggtgttcccgctggtcgtgaaggccggtgcgggcagcgcccgcgacacgctctcc
gtgctcgaccagctcatctccggcgccggccccgaaggcgtcagctacccgcgggccgtg
acgctgctcggtgtcacggatgtcgcgctgatcgatgacatgtgcgacgccctggcggcg
ggcgacggcgctgcggcctaccagacgatcgaccgcgtggccgaggccggccacgacccc
cggcgcttcgcctccgacctgctcgaacgcttccgcgacctgatcatcctccagcagatc
ccggacgccgtgaccaagggcctgatcgacggcccggccgaccagctggagcagatgggc
gcccaggcaacccgcctcgggccggccacgctctcccgctgcgccgacatcgtgcacaac
ggcctggtcgaaatgcgtggcacgacagcgccgcggctgctcctcgagctgatcacggcg
cggatgctgctgccgggtgctgacgattcgagcaacgcgctgctgcagcggctggagcgg
atggagcggcggctcacgctgagtcctggcgaggagcttccgcctgcggaatccgggccg
caggctgctccgatttcggctgcacctgctggtggcggcgggatttcagctgcgtctgct
ggtggcggcgggatttcggctgctcgcgcggcggctgcggctgcggctgctgggcgacgt
gccccggcgggcggatcggctgcgcaatccggtcttaccgcgcaatccggctcaggagat
gcggccgcggcaccctccgcgcctgcggaggcggtcacgggctcgggctcgggctcggga
cagcctgaagcggcgggcgtggcatctcccggctccgtcacggcggagaccacagccgcg
cggccggtgtccggcggcggggcaggtggccttgcgtccgcggccggtccggtttcagcc
gtgcctgatccgtcggccggctcggccgggtcggtttcggcactgcccggtgctggtgaa
gcttcggttcagtcggccgctccggtttcggcgatgcccggctctgcttctccggtctcg
tccgcgccctttgctccggcctcagctccaccagctgccccggagtcctatccgggagct
gccggcgcggtttccgctccgcctgagaacggtgttcgccgggccgagcccgcaggtgtc
atgccggatgcgcccttcgagccaggcctggaaaccgccgtgccggggcagctcaccgcc
gcctccatccgcgaggtctggccggaaatcatggtcgcggtcggtcgcaagagcaaaaag
atcgctgccctcgcccagggcgcaactgttcgcgacctcgaaggtcagacggtcgtcctg
acgttccgcttcccggcgcacgccaagatggtcgccgcggagcccgcgctgctgtccgac
gcgctctacgaggcgctcggcggccgctggcagatccgctgcgacgtggccggtgacagc
gggccttccccgggttccacgtcccgggctggtacggcgtctcgcgcccctcagccgagt
ccggcatcgggcccggcggcctcggcctccggcattccgcagcccagcgccccggcttcg
gcaccgggcggaacagcttcggcttcggcacccggtgggaccgctccggcttcggcgcct
ggcggaacagctccggcttcggccgctggcgggaccgcgccggcttcggcgcctggcggg
accgctcaggcatcagcgcccggcggaacagctccggcttcggcgcctggtggggccgct
tcggcttcggccgctggcgggaccgctcaggcatcggcacccggcgggaccgctccagcg
tcagcgcccgggaccaggccggcgtcgggcgtgccttcggcgccggtttcgggctacccc
gatgagggcctgaccggctccccggaggctggagcatcgggttcggcgttgggcgctccc
tacggcggggcggccgatccggcgtccagcgctgcccacggcatgcctgcatccccggca
agtggatcttccggcccttcagcgggcgctggtggatctttcggggcgggtgccgggtcc
gggcggggcggggcttcaagtccggcgcagcgtgctcctcagggcggcgccttaagtccc
gcgcagcgtgactctcaagatcgacagggagcccgctcgtcgggtgggcggcagagcgcg
accgcgcccagcgcatccgctgccggcgacgacggtgacgggtggcctgagccggcacgg
ccgggaggcctggccacagcggtagtcaccccgcccgtcgtcgaggaggaagaggcgtgg
cccgagacggccaggccgggtggcgtcgcaccccgcgacagcgacccgagtgtcggccag
agcagcccggtcaccactcccgacctcaccggcccggccggaggccgcggtttcggcggt
ccggcaacaccggcccccgcctcagctcagcaggccccgaccgcaccggcgccgaccacc
cctgccccgaccgcgccggcccggaccgcaccggccccgactccgccggccgcgccgccg
gcggcaccggcgaccgcgcctccggctgccggcggacgtcggacgtccagcggtctggcc
gcagcccgtgcagcagcagccggcgcaggtcgcggcacgaacgccgctgcacctgccaag
accggcgcctggtcggacggctcgccgaccgaggaagcgccttacgacccggagtacgac
ggtccggtccggccggggaacggcagtgcgccggcggccaagggcgggcagaagttcgac
ggtttcgaccccggtgacgagccgctcgacgacgtgatcgacgagaagaccgcgcggcag
agcagcgaacagcaggccgtgcagcttctccgggacgcgctcggtgcggagaagatcagc
gagtcctga
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