KEGG   Aspergillus flavus: AFLA_045990Help
Entry
AFLA_045990       CDS       T01090                                 

Definition
(RefSeq) DNA ligase Cdc9, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
afv  Aspergillus flavus
Pathway
afv03030  DNA replication
afv03410  Base excision repair
afv03420  Nucleotide excision repair
afv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:afv00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    AFLA_045990
   03410 Base excision repair
    AFLA_045990
   03420 Nucleotide excision repair
    AFLA_045990
   03430 Mismatch repair
    AFLA_045990
Enzymes [BR:afv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AFLA_045990
    6.5.1.6  DNA ligase (ATP or NAD+)
     AFLA_045990
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AFLA_045990
DNA replication proteins [BR:afv03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    AFLA_045990
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     AFLA_045990
DNA repair and recombination proteins [BR:afv03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AFLA_045990
   NER (nucleotide excision repair)
    Other NER factors
     AFLA_045990
   MMR (mismatch exicision repair)
    Other MMR factors
     AFLA_045990
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DUF4821 Synaptonemal_3
Motif
Other DBs
NCBI-GeneID: 7912483
NCBI-ProteinID: XP_002378061
UniProt: B8NBM4
LinkDB All DBs
Position
Unknown
AA seq 953 aa AA seqDB search
MSTRRRSAIVARFQKPISFTPVPQRLYLISCRACVQQDIVGRKLLQRQFGTYRPQTNLRT
LASLYPSTFFRMADSKGRKQATLGRFFGSNADPKEAPKKQTTLSFSGKKDKAQKTAAKSA
TPHDSSSTDGQASDGVGSESTTEADIAETKPEPAQEDGYKDSNDLKRKESEEEASDSDVQ
PAQKRRRRTSRSGEGTPSPKKKTKTPSPKRSKAKKDVKPEETEPPAVVKKASGEETPEED
KSEDEALSASEDEEEKPEVMKKTMEKVQATLKASGTEPYPDWKPGTPVPYAALCTTFSLI
EMTTKRLVILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAADYAGVELGIGESLIMKAIG
ESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLGIAKVQGHGS
QDKKISGIKKLLSAADPETAGKGSKGVDITKNKGGPSEAKYIVRFLEGKLRLGLAEKTVL
VALAQAVVTHEAALKGEKAPSPEKLAEGEAILKTVYSELPAYEIIIPAMLKNGLSKLHEA
CKLQPGIPIKPMLAKPTKSITEVLDRFEGKEFTCEYKYDGERAQIHYVAPDATHNYPEAQ
HTLQKDGKGLAAIFSRNSEDLSKKYPDVLAKLDSWIKDGVKSFVLDCETVAWDTVNKKVL
PFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTVKKSLRERRELLHESFQVTEGEF
QFAQFGNTNVLDEIQELLDDSVKASCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLSG
VGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNANTQTYESICNIGTGFSEANLEELHKEL
SPLVIDRPKPFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFVGTTGGGK
GVSLRFPRFIKAREDKKPEQATTTRQVAEMYRKQEAVAKENAGKKGVDDDFEY
NT seq 2862 nt NT seq  +upstreamnt  +downstreamnt
atgtccactcgtcgcagatccgcaattgttgcgcgcttccagaaaccaattagttttacg
ccagtaccgcaacgtctctatttaatcagctgtcgtgcttgtgtccaacaagacatagtt
ggccgcaaactcctccaaagacaattcggtacttaccgaccgcagacgaatctccgcaca
ctagcttctctttacccatctacatttttcagaatggcagactcaaagggccggaagcag
gctacgctggggcgattcttcggctcgaatgcggacccgaaagaagctcctaagaaacag
actactctttctttctctggtaagaaagataaagctcagaaaactgcggcgaaatcagcg
acaccacacgactcttcatctacagatggacaagcttctgatggggttggaagcgaaagt
actaccgaagcagatatagctgagactaagccggagcctgctcaggaagatggatataaa
gactctaatgacttgaaaaggaaagagagcgaggaagaagccagtgacagcgatgttcag
cctgcacagaaacggagacggaggacttcacgaagcggggaagggacgccttctccgaag
aagaaaactaagacaccatctcctaagcgttccaaagccaaaaaagacgtcaaacccgaa
gagacagagccgccggctgttgtaaagaaagcgtcgggagaggagactcctgaggaagac
aaatccgaggatgaagcgttgtcggctagcgaagacgaggaggaaaagcccgaggtgatg
aaaaagaccatggaaaaggtgcaggctacattaaaagcgagtggcactgagccatatccg
gactggaagcctggcactcccgtcccttacgcagcattgtgcactaccttctcgcttatt
gaaatgaccaccaagcgattggtgatccttgcccattgctctttgtttcttcgccaggtc
cttcgattgacaccacaagacctccttccgacagtccaacttatgatcaacaaactggct
gccgactatgccggcgtcgagttgggaattggcgagtccctgatcatgaaagccattggc
gagagtaccggccgcagtttagcggtcatcaaggcagatcagcacgagattggagacctg
ggcttggtggcagctaagagtcgatcgaaccagcctaccatgttcaagccgaagccattg
acagttcggggagttcacgaaggtcttttgggtatcgccaaagtccagggtcacggttct
caggacaagaaaatttccggtatcaagaagcttctctctgccgccgacccagaaacagcg
ggaaagggtagcaaaggtgtggatatcacgaagaacaagggtggccctagcgaagccaag
tatattgttagatttttggaaggaaaattgagactagggctggctgaaaagaccgttctt
gttgcccttgctcaagcagtggtgactcatgaagccgccctgaagggagagaaggctcct
tccccagaaaaactggctgagggcgaggctatcttaaagacggtgtacagcgaattgccc
gcttatgagatcatcattcccgccatgctcaagaacggcctgtccaagcttcacgaggcc
tgcaagctacagcccggtatcccgattaagcctatgcttgctaagccaacgaaatccatc
accgaagtgcttgaccgttttgaaggaaaggagtttacgtgcgagtataagtacgacggg
gagagagcacagattcactacgttgcaccagacgcaacccacaactatccggaagcacaa
cacacgttacagaaggatggcaaaggcctcgctgcgattttttctcgtaactcagaagac
ctgtcgaagaaataccctgatgtgctggctaagctcgacagttggatcaaggatggtgtt
aagagctttgtcttggactgcgagactgttgcttgggatacggtgaacaagaaggttctg
cccttccagcagctgatgactcgcaaacgcaaagacgtcaaggctgaagacgtcaaggtt
aaagtttgtgtattcgcctttgacctcttattcctgaacggagagcctactgtcaagaaa
tcacttcgcgaacgccgagaacttttacatgaatcattccaggttacggaaggcgagttt
cagttcgctcagttcggtaacaccaacgtactggatgagattcaggagttgctggacgac
agtgtcaaggcatcgtgcgaaggtctaatggttaagatgttggacacggacgaaagtggc
tacgagccgagtaagcggagtcgaaactggctcaaggttaagaaggactacctcagcggt
gtcggtgattcgcttgaccttgttgttcttggtgcatactacggacgaggcaagcgtaca
tccgtctatggtgcattccttctggcggcgtacaatgcaaatacgcaaacttacgagtca
atctgtaacattggcaccgggttttccgaggccaaccttgaagagcttcataaggagctc
tctcccttggtcattgatcgaccaaagccattttacacccattcgacggtccccaaggat
cagcctgatgtttggtttgagccccggttggtctgggaagtgaagacagccgatttgacg
cttagcccgcgatatcaagctgcggctgatgagtttgtgggtacgaccggtggaggcaaa
ggtgtttctctccgcttcccccggttcatcaaggcacgagaggacaagaagccggagcaa
gcaacaacgacgaggcaggtagccgagatgtatcggaaacaagaggcggtcgccaaggag
aatgcgggtaagaagggagtagacgatgattttgaatattag

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