Anaeromyxobacter sp. Fw109-5: Anae109_4029
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Entry
Anae109_4029 CDS
T00559
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw03030
DNA replication
afw03430
Mismatch repair
afw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Anae109_4029
03430 Mismatch repair
Anae109_4029
03440 Homologous recombination
Anae109_4029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afw03032
]
Anae109_4029
03400 DNA repair and recombination proteins [BR:
afw03400
]
Anae109_4029
Enzymes [BR:
afw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Anae109_4029
DNA replication proteins [BR:
afw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Anae109_4029
DNA repair and recombination proteins [BR:
afw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Anae109_4029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
CAF1
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABS28207
UniProt:
A7HHL1
LinkDB
All DBs
Position
complement(4717886..4718602)
Genome browser
AA seq
238 aa
AA seq
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MVRATGIASLLRLVRRKATGAAAEVRYARRRTLGSEEWTQPIRTMTFTVLDCEMTGLDPA
RDEILSIGAVRIRNGRIVMAERFYQVFKPTEAVSPKEVILIHGLGPDEVSRGLPLGDALE
RLLAFIGDSVVIGHFTSVDLSFLNAALASRKERSLKNPALDTRLLYAWWRRRTSPAGQAA
ADANLEDIVIEMGLPRYPAHHAFYDALTTGMVFLKLLGDFEASGAVQFRALYREAGVY
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggtccgagccaccggcatcgcctcgctcctccggctcgtccggcgaaaggccaccggc
gcggccgcggaggtccgctacgcgcgccggaggacgctcggctccgaggagtggacgcag
ccgatccggacgatgaccttcaccgtgctcgactgcgagatgaccgggctcgacccggcg
cgggacgagatcctctcgatcggcgcggtccggatccgcaacggccggatcgtgatggcc
gagcgcttctaccaggtgttcaagccgaccgaggcggtctcgccgaaggaggtgatcctc
atccacggcctcgggccggacgaggtcagccgcggcttgccgctcggcgacgccctcgag
cggctcctcgccttcatcggcgacagcgtcgtgatcggccacttcacgtccgtcgatctg
agcttcctgaacgcggcgctcgcgtcgcgcaaggagcggtcgctcaagaaccccgcgctc
gacacgcggctgctgtacgcctggtggcgccggcggacctcgccggcgggccaggccgcc
gccgacgcgaacctcgaggacatcgtcatcgagatgggcctgccgcgctatccggcgcac
cacgcgttctacgacgcgctcaccaccggcatggtgttcctgaagctgctcggggacttc
gaggcgtccggtgccgtgcagttccgcgcgctgtaccgggaggcgggggtgtattag
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