Anseongella ginsenosidimutans: FRZ59_14940
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Entry
FRZ59_14940 CDS
T06183
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
agd
Anseongella ginsenosidimutans
Pathway
agd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ59_14940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agd03019
]
FRZ59_14940
03016 Transfer RNA biogenesis [BR:
agd03016
]
FRZ59_14940
Enzymes [BR:
agd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FRZ59_14940
Messenger RNA biogenesis [BR:
agd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FRZ59_14940
Transfer RNA biogenesis [BR:
agd03016
]
Prokaryotic type
tRNA degradation factors
FRZ59_14940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
DUF349
Motif
Other DBs
NCBI-ProteinID:
QEC53499
LinkDB
All DBs
Position
complement(3578265..3580616)
Genome browser
AA seq
783 aa
AA seq
DB search
MSQSGITKSFDLGDGRTISIETGRLAKQADGAVVVRMGDAMLLATAVSSKEAKPGADFLP
MSVDYQEKFAAMGRIPGSFMRRESRLSDYEVLISRLVDRALRPMFPDDYHADTQIMITMI
SGDKEVSPDCLAGLAASAALTISDIPFNGPISEVRVARVDGQFMVNPTVTDLEKADFEIM
VAASEKDIVMVEGEMQECSEADLLEALKIAHEAIKIQVRAQLELAEMVGKAKREYEHETN
DEELRQRIKSELYDKIYEIAKSGSSKQERSEKFKALRDEFKEAQGEIDEERELLIKRYYH
DVEKEAMRDMVLNERTRLDGRSATDIRPIWCEVDYLPSAHGSAIFTRGETQSLTTVTLGA
KMDEQLIDSAMFYGYNKFLLHYNFPGFSTGEVKPNRAPARREIGHGNLAARALKQVLPPD
SENPYTIRIVSDILESNGSSSMATVCAGALALMDAGVKLKSPVSGIAMGMISDSASGKYA
ILSDILGDEDHLGDMDFKVTGTANGITACQMDIKVDGLSYEVLAEALEQARQGRLHIMGE
MEKALTGPREDYKPHAPRIVEISIPREFIGAVIGPGGKNIQELQRETGTTVNIEEVGDEG
KVQIFATDKESLDNAANRIRMITATPDVGEVYDGIVKTIMSFGAFVEFMPGKDGLLHISE
IDWSRLESMDGVFQVGDTVKVKLIEIDKKTGKFRLSRKVLLPKPEGAPQDRPERQGHQHS
RHGGQRQDRDRPRNQDRDRPRDQDRGRYEDRSQQDRPQEERPRQEGSQQENPEQAPRQED
NDL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaagcggaattaccaagtcatttgatttgggcgatggaagaacgatttccatc
gaaacaggaagattagcaaagcaagccgacggcgcagtagttgtccgcatgggtgacgcc
atgctgctggcaaccgccgtatcgtcaaaagaagccaaaccaggcgcggattttctgcct
atgtctgttgattaccaggaaaaatttgcggcaatgggccgtatcccgggtagttttatg
agacgtgagtccaggctttccgattatgaagtattgatcagccgtttagtggacagggct
ctgcgccccatgttcccggatgattatcacgccgacacacagataatgatcacaatgatc
tccggcgataaggaggtttctcctgactgcctggccggcctggcagcctcagctgccctg
accatcagcgatatacctttcaacggtccgatctcggaagtgcgggtagcgcgggtagac
gggcaattcatggtaaatccaacggttaccgacctggaaaaggcggactttgagatcatg
gtggctgcttctgaaaaagatatagtcatggtagagggcgagatgcaggaatgttccgaa
gcagacctcctggaagccctgaaaattgcccacgaggcgattaaaatacaagtgcgggca
cagctggagctggcggaaatggttggaaaggccaagcgggaatatgagcatgaaaccaac
gacgaagagctgaggcagcgcattaaaagcgaattgtacgataagatctacgagatcgcc
aaatcgggctcttccaagcaggaacgttccgaaaagtttaaggcgctccgggacgagttt
aaagaggcgcagggcgaaattgatgaagagcgcgaactcctgatcaaacgctattaccac
gatgtggaaaaggaagcgatgcgcgatatggtgctgaatgagcggacccgtcttgacgga
cgttctgcaaccgatatccggcctatctggtgcgaagtggattatcttccttccgcccac
ggatcggccatttttacccggggagaaacccagtcacttaccaccgttacgctgggagcg
aaaatggatgagcagctgatcgatagcgcgatgttctatggctataataagttcctgctg
cattataatttccctggcttttcaacaggtgaggtgaaacccaaccgggctcctgcaaga
agggagatcggacacggtaacctggcggcaagagcgctcaaacaagttcttcccccggat
tctgaaaacccttataccattcgcatcgtttccgacattcttgaatcaaacggctcttct
tcaatggctacggtttgcgcaggagcgctcgcattgatggatgccggggtaaaactgaaa
tcaccggtttcagggattgccatgggaatgatcagcgactcggcttcagggaaatatgcc
atcttatccgatatccttggggacgaggatcacctgggtgatatggactttaaggttacc
gggacggcaaatggtattactgcctgccagatggatattaaagtggacggcctttcctat
gaagtgctggctgaagcccttgagcaggcccgtcagggacgtctgcatatcatgggtgaa
atggagaaagcgcttaccggcccgcgtgaggattacaaaccgcatgcaccgcgtattgtt
gagatttccattccacgcgaatttatcggcgccgttatcggaccaggcggaaagaacatc
caggagcttcaacgcgaaacgggcacgactgttaatatagaagaggtgggtgatgaaggc
aaggtgcagatattcgccacagataaggaatccctcgataatgctgccaaccggatcagg
atgatcacggcaacccctgatgtgggagaagtctacgatggtatcgtcaaaaccattatg
tcatttggcgctttcgtggaattcatgccgggaaaagacggcttgttgcatatatctgaa
attgactggagccgcctcgaaagcatggacggcgtattccaggtaggcgatacggttaag
gtgaaattgatcgagatcgataaaaagaccggcaagttcaggctttcccgcaaagtattg
ctgcctaagcccgaaggcgcccctcaggacaggccggagcggcagggccaccagcattcg
cgccatggcgggcagcggcaggaccgcgaccgtccgagaaaccaggaccgggatcgtcca
agagatcaggaccgcggccgttacgaggatcgctctcagcaggaccgcccgcaggaggaa
cgtccgcggcaggagggctcgcagcaggaaaatcctgagcaagctccccggcaggaagac
aatgacttgtag
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