KEGG   Archangium gephyra: AA314_02568Help
Entry
AA314_02568       CDS       T03948                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
age  Archangium gephyra
Pathway
age03030  DNA replication
age03410  Base excision repair
age03420  Nucleotide excision repair
age03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:age00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AA314_02568
   03410 Base excision repair
    AA314_02568
   03420 Nucleotide excision repair
    AA314_02568
   03430 Mismatch repair
    AA314_02568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:age03032]
    AA314_02568
   03400 DNA repair and recombination proteins [BR:age03400]
    AA314_02568
Enzymes [BR:age01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AA314_02568
    6.5.1.6  DNA ligase (ATP or NAD+)
     AA314_02568
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AA314_02568
DNA replication proteins [BR:age03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    AA314_02568
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     AA314_02568
DNA repair and recombination proteins [BR:age03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AA314_02568
   NER (nucleotide excision repair)
    Other NER factors
     AA314_02568
   MMR (mismatch exicision repair)
    Other MMR factors
     AA314_02568
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: AKJ00942
UniProt: A0A0G2ZLK6
LinkDB All DBs
Position
complement(3099428..3101023)
Genome map
AA seq 531 aa AA seqDB search
MHRLADLYEALDATTSTNAKVEALVGYFRDTPPEDAAWGLFFLTGRRLKRLIPSKALRQW
VRELTDTPEWLFDETYAVVGDLAEVIALLLDQTERPAATEELPLSRWLEERLLPLGGLSL
PEQRERVTGWWHVLPRRELFLFNKMLTGELRVGVSDTLVVRALAQHAGLPPAAVSHRLMG
TWAPSRAFFEQLVAPDVSDGDRSRPYPFYLASPLEQPPAQLGERDAWLVEWKWDGIRGQL
IRRQGGVYLWSRGEELITERFPEIAEAAASLPDGTVLDGEVLAYAEGQPLPFSLLQRRIG
RQKLTAKVLAEAPAAFMAYDLLEQEGQDLRPLPLRERRARLEALLRDRPMFPVSPVITAP
TWEALAEARHESRSRNVEGFMIKRLESPYQHGRKRGDWWKWKIDPFTVDAILLYAHPGHG
RRASLYTDYTFAVWNGEELLPIAKAYSGLTDEEIARLDRWIRGHTREKFGPVRSVEPLQV
FELHFEGIAASPRHKSGIALRFPRIARWRSDKTPRDADSLERLKELLHAPA
NT seq 1596 nt NT seq  +upstreamnt  +downstreamnt
gtgcaccggctcgcggatctctacgaggcgctcgacgccaccacctccaccaacgccaag
gtggaggcgctggtgggctacttccgtgacacgccccccgaggacgccgcgtgggggctg
ttcttcctcaccggccgccgcctcaagcgcctcatcccctccaaggccctgcgccagtgg
gtgcgcgagctgaccgacacccccgagtggctcttcgacgagacgtacgccgtcgtcggg
gacctcgccgaggtcatcgccctcctgctcgaccagaccgagcgtcccgccgccaccgaa
gagctgcccctgtcccgctggctggaggagcgcctgctgcccctcggcgggctctccctc
cccgagcagcgcgagcgcgtcaccggctggtggcacgtgctcccccgccgcgagctgttc
ctcttcaacaagatgctcaccggcgagctgcgcgtcggcgtctccgacacgctcgtggtc
cgcgccctggcccagcacgccggactgcctccggccgccgtgtcccaccggctcatgggc
acctgggctccctcgcgtgccttcttcgagcagctcgtcgccccggatgtctccgatggg
gaccgctcgcgcccctatccgttctatctcgccagccccctggagcagcctccggcccag
cttggcgagcgcgacgcctggctcgtcgagtggaagtgggatggcatccgcggccagctc
atccgccgccagggtggcgtctacctgtggagccgcggcgaggagctcatcaccgagcgc
ttcccggagatcgccgaggccgccgccagcctccccgatggcaccgtgctggatggcgag
gtgctcgcctacgccgaggggcaacccctccccttcagcctcctccagcgccgcatcggc
cgccagaagctcaccgccaaggtgctcgccgaggctcccgccgccttcatggcgtacgac
ctgctcgagcaggagggacaggacctccgcccgcttccgctgcgcgagcgccgcgcacgc
ctggaggccctgctgcgcgacaggccgatgttccccgtgtcaccggtcatcacggccccc
acgtgggaggccctcgccgaggcccggcatgagtcccgctcgcgcaacgtcgagggcttc
atgatcaaacgcctcgagtccccctaccagcacggccgcaagcgcggggactggtggaag
tggaagatcgatcccttcaccgtcgacgccatcctgctctacgcacatcccggccacggg
cggcgggcctcgctctacacggactacacgttcgccgtgtggaacggtgaggaattgctg
cccatcgccaaggcgtactcgggcctgacggacgaggagatcgcccggctcgaccggtgg
atccgcgggcacacgcgcgagaagttcggccccgtccgctccgtcgagcccctccaggtc
ttcgagctccacttcgagggcatcgccgcctctccccgccacaagtcggggattgccctg
cgctttccgcgcatcgcccgctggcgctcggacaagaccccgcgtgacgcggactctctc
gagcgtctcaaggaactgctccatgcccccgcgtag

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