Archangium gephyra: AA314_03923
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Entry
AA314_03923 CDS
T03948
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
age
Archangium gephyra
Brite
KEGG Orthology (KO) [BR:
age00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
age03021
]
AA314_03923
Transcription machinery [BR:
age03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA314_03923
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
Sigma70_r4_2
Sigma70_r4
HTH_50
MarR_2
HTH_24
HTH_AsnC-type
HTH_1
MarR
UPF0122
HTH_10
HTH_3
GcrA
YqgF
HTH_5
DUF603
TrmB
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AKJ02297
LinkDB
All DBs
Position
complement(4779884..4780468)
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AA seq
194 aa
AA seq
DB search
MSRVGSSRELTEWVVRAARGEAPAFSELYRRTRPLVARLTASFAPLDADEVEDVIQETYV
RAFKALPRLKEPAAFEAWLLSIARNRARTRLERKGQTRRMDEEVSDPQPETVAVVPEALQ
LERDMAVVRQLIAELPEGEEKKTVHLFYVEGELSAREIAEKLGVGKSAVTMRLERFRARI
KQELLRRVLAGRWE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggtgggttcctctcgggaactgacggagtgggtggtgcgggccgcgcgagga
gaggcgcctgccttcagcgagctgtaccggcggacccggcccctggtggcccggttgacg
gccagtttcgcgccattggacgcggatgaggtggaagacgtgattcaggagacctacgtg
cgcgccttcaaggcgctcccccggctcaaggagccggcggccttcgaggcgtggctcctg
tccatcgcccgcaaccgcgcccgcacccgcctggagcgcaagggccagacccgccgcatg
gacgaggaggtgtccgacccccagccggagaccgtcgcggtggtgcccgaggccctccag
ctcgagcgggacatggccgtggtgcgccagctcatcgccgagctgcccgagggcgaggag
aagaagaccgtccacctcttctacgtggagggggagctgtcggcccgggagatcgccgag
aagctcggggtgggcaagagcgccgtgacgatgcgcctggagcgtttccgggcccgaatc
aagcaggagctgctccggcgcgtgctcgccggacggtgggagtag
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