Agromyces protaetiae: ET445_13345
Help
Entry
ET445_13345 CDS
T05835
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
agf
Agromyces protaetiae
Pathway
agf03030
DNA replication
agf03430
Mismatch repair
agf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ET445_13345
03430 Mismatch repair
ET445_13345
03440 Homologous recombination
ET445_13345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agf03032
]
ET445_13345
03400 DNA repair and recombination proteins [BR:
agf03400
]
ET445_13345
Enzymes [BR:
agf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ET445_13345
DNA replication proteins [BR:
agf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ET445_13345
DNA repair and recombination proteins [BR:
agf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ET445_13345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QAY74170
UniProt:
A0A4P6FD00
LinkDB
All DBs
Position
complement(2867279..2870851)
Genome browser
AA seq
1190 aa
AA seq
DB search
MWAVAPRLVTPDEPHSRSPVADNFVHLHVHTEYSMLDGAARVGELVRAAADYGMPAVAMT
DHGNVFGAYDFWKQATDAGVKPIIGTEAYLTPGTHRADKTRVRWGSGGGDDVSGAGAYTH
MTLLAETTEGMHNLFRLSSLASIEGYYFKPRMDRELLQNYSTGLIATTGCPSGEVQTRLR
LGQYKEAVQAAAEFRDIFGKDNFFCELMDHGLGIETRIRGDLLRLAKELDLPLVATNDLH
YTHAHDAKSHAALLCVQSGSTLDDPNRFKFDADDFYLKTSAEMRQVWRELPEACDNTLAI
AERCDVQFNTSANYMPRYPVPDGENEESWFVKEVEKGLHVRYPNGIPAEVRKQADYEVGV
ISQMGFPGYFLVVADFINWSKTNGIRVGPGRGSGAGSMAAYAMKITDLDPLQHGLIFERF
LNPDRVSMPDFDVDFDERRRGEVIKYVTDKYGEERVAQIVTYGTIKAKQALKDSSRVLGF
PFGMGEKLTKAMPPAVMGKDIPLTGILDSAHPRYKEAGDIRAIIETDAEAKTVFETALGI
ENLKRQWGVHAAGVIMSSDPLIDIIPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRN
LTIIDDALDNIEANRGFRPVLEDLALDDEEAYRLLGSGDTLGVFQLDGGPMRALLRQMKP
DNFEDISAVIALYRPGPMGANSHINYALRKNGLQEITPIHPEFTESLADILDTSYGLIIY
QEQVMAIAQRVAGFSLGQADILRRAMGKKKKSELDKQYEGFEAGMKANGYSDAAIKTLWD
ILLPFSDYAFNKAHSAAYGVLSYWTAYLKAHYPAEYMAALLTSVGDARDKLALYLNECRR
MGIKVLPPDVNESIGFFAAVGDDIRFGLGAVRNVGFNVVDAIRAARESKGRFESFHDFLK
KCPIQVANKRTVESLVKAGAFDSLGHTRRALVEIHEGAVESVVKEKRAEEVGDVGFDFDS
LFEDHEREAVPSLVPDRPEWAKKDKLAFEREMLGLYVSDHPLAGLEAPLAKHASTSILDL
TGSDSTQDGDTVVIAGLVTSVQHRIAKNSGNQYGMITVEDFSGEITVMFMGKAYQEFAPA
LKSDSIVVVRGRVSLRDDGMNLHAHSVFQPDLGQGDENGPVLISIPDVRATTDTIVALGD
VLIRHRGDTEVRLRLTKGRSARVFELPYPVKVSVDFYGELKSLLGPNCLV
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggtcgcgcctagactggtcactcccgacgaaccccattcgaggagccccgtg
gccgacaatttcgtccatctgcacgtccataccgagtactcgatgctcgacggggcggcc
agggtgggcgaactcgtgcgggctgccgccgactacggcatgcccgccgtcgcgatgacc
gatcacggcaacgtgttcggcgcgtacgacttctggaagcaggcgaccgacgcgggcgtg
aagcccatcatcggcaccgaggcgtatctcacgccgggcacgcaccgcgccgacaagacg
cgcgtgcgttgggggtctggcggcggtgacgacgtgtcgggcgcgggtgcgtacacgcac
atgaccctcctcgctgaaacgaccgagggcatgcacaacctcttccggttgtcgtcgctc
gcctcgatcgaggggtattacttcaagccgcgcatggaccgcgaactcctccagaactac
agcacgggcctcatcgcgacgacgggctgcccgtcgggcgaggtgcagacccggctccgg
ctcggccagtacaaagaggccgtgcaggccgcggccgagttccgagacatcttcggcaaa
gacaacttcttctgcgagctcatggaccacgggctcggcatcgagacgcgcatccgcggc
gacctcctgcggctcgcgaaagagctcgaccttccgctcgtcgcgacgaacgacctgcac
tacacgcacgcgcacgacgcgaagagccacgcggccctcctgtgcgtgcagtcgggatcg
acgctcgacgacccgaaccggttcaagttcgacgccgacgacttctacctgaagacctcc
gccgagatgcgccaggtctggcgcgagctgcccgaggcgtgcgacaacacgctcgcgatc
gccgagcggtgcgacgtgcagttcaacacgagcgcgaactacatgccgcgctatcccgtt
cccgatggcgagaacgaggagagctggttcgtgaaggaggtcgagaagggcctgcacgtg
cggtacccgaacggcatccccgccgaggtgcgcaagcaggccgactacgaggtcggcgtc
atcagccagatgggcttccccggctacttcctcgtcgtcgccgacttcatcaactggtcg
aagacgaacggcatccgcgtcggcccgggccgcggttcgggcgccggctcgatggcggcg
tacgcgatgaagatcaccgacctcgaccccttgcagcacggcctcatcttcgagcggttc
ctgaaccccgaccgcgtctcgatgcccgacttcgacgtcgacttcgacgagcgtcggcgc
ggcgaggtcatcaagtacgtgaccgacaagtacggcgaggagcgcgtcgcgcagatcgtc
acgtacggcacgatcaaggccaagcaggcgctcaaagactcgagtcgcgtcctcgggttc
ccgttcggcatgggcgagaagctcacgaaggcgatgcccccggccgtcatgggcaaggac
attccgctcacgggcatcctcgactcggcgcacccgcgctacaaggaggccggagacatc
cgggccatcatcgagaccgacgccgaggcgaagaccgtcttcgagacggcgctcggcatc
gagaacctcaagcgccagtggggcgtgcacgcggcgggggtgatcatgtcgagcgatccg
ctcatcgacatcatccccatcatgaagcgcgaacaagacggccagatcgtcacgcagttc
gactaccccgcgtgcgagtcgctcggcctcatcaagatggacttcctggggctccggaac
ctcacgatcatcgacgacgcgctcgacaacatcgaggccaaccgcggcttccgcccggtg
ctcgaagacctcgcgctcgacgacgaagaggcctaccgcctcctcggatcgggagacacg
ctcggcgtgttccagctcgacggcggccccatgcgggcgttgctgcgtcagatgaagccc
gacaacttcgaagacatctccgccgtcatcgcgctctaccggccgggcccgatgggcgcg
aactcccacatcaactacgcgctccgcaagaacggcctgcaagagatcacgccgatccac
cccgagttcaccgagtcgctcgccgacatcctcgacacgagctacggcctcatcatctac
caggagcaggtgatggcgatcgcccagcgcgtcgccgggttctcgctcggtcaggccgac
atcctgcgtcgagcgatgggcaagaagaagaagagcgaactcgacaagcagtacgagggc
ttcgaggccggcatgaaggccaacggctattcggatgccgcgatcaagacgctttgggac
atcctgctcccgttctccgactacgccttcaacaaagcgcactcggccgcgtacggcgtg
ctgagctactggacggcgtacctcaaagcccactatccggccgagtacatggcggcgctc
ctcacgagcgtcggcgacgcgcgcgacaagctcgcgctctacctcaacgagtgccgacgc
atgggcatcaaggtgttgccgcccgacgtcaacgagtcgatcgggttcttcgcggccgtc
ggcgacgacatccgcttcggcctcggcgccgtgcgcaacgtcgggttcaacgtcgtcgat
gcgatccgcgccgcgcgcgagtcgaaggggcgcttcgagtcgttccacgacttcttgaag
aagtgccccatccaggtcgcaaacaagcgcacggtcgaatcgctcgtcaaggcgggtgcg
ttcgactcgctcgggcacacgcgacgggcgctcgtcgagatccacgagggtgcggtcgag
tcggtcgtgaaggagaagcgcgccgaagaggtcggcgacgtcgggttcgacttcgacagc
ctcttcgaagaccacgaacgcgaagccgtgccttcgctcgtgcccgaccgacccgaatgg
gcgaagaaggacaagctcgcgttcgagcgcgagatgctcggcctctacgtctccgaccat
ccgctcgccggactcgaggcgccgctcgcgaagcatgcatcgacgtcgatcctcgacctc
accggatccgactccacgcaagacggcgacaccgtcgtcatcgcggggctcgtgacgagc
gtgcagcaccgcatcgcgaagaactcgggcaaccagtacggcatgatcacagtcgaggac
ttctcgggcgagatcacggtcatgttcatgggcaaggcctatcaagagttcgcgcccgcg
ttgaaaagcgactcgatcgtcgtcgtccgtgggcgggtgagcctccgcgacgacggcatg
aacctgcatgcgcacagcgtgttccagcccgacctcgggcagggcgacgagaacgggccc
gtgctcatctcgatccccgacgtgcgggcgacgaccgacacgatcgtcgcgctcggcgac
gtgctcatccgacaccgcggcgacaccgaggtgcggttgcggctcacgaagggccggagc
gctcgcgtgttcgaactgccgtacccggtgaaggtgagcgtcgatttctacggggagctc
aagagcctcctcgggccgaactgcctcgtgtag
DBGET
integrated database retrieval system