KEGG   Agrobacterium sp. H13-3: AGROH133_07410Help
Entry
AGROH133_07410    CDS       T01432                                 

Gene name
ddl
Definition
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
agr  Agrobacterium sp. H13-3
Pathway
agr00473  D-Alanine metabolism
agr00550  Peptidoglycan biosynthesis
agr01100  Metabolic pathways
agr01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:agr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    AGROH133_07410 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AGROH133_07410 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    AGROH133_07410 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:agr01011]
    AGROH133_07410 (ddl)
Enzymes [BR:agr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     AGROH133_07410 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:agr01011]
 Precursor biosynthesis
  Amino acid ligase
   AGROH133_07410 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 GARS_A ATP-grasp_3 CPSase_L_D2 Phage_Mu_Gp45
Motif
Other DBs
NCBI-ProteinID: ADY65004
UniProt: F0L7Y5
LinkDB All DBs
Position
circular:complement(2008487..2009413)
Genome map
AA seq 308 aa AA seqDB search
MGGKHVAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGRDIAAVLGELRPDVAF
NALHGPFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVADERVMNR
FEFTSEHPLAPPYVVKPVREGSSFGVVIVKEDQSHPPQILTSSEWRYGDHVMVERYIHGR
ELTCGVLDGEALGVTEVVPLGHNFYDYDAKYAAGGSKHVIPAEISPKIYQKIQTLAVMAH
RAIGCRGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGNLVSWM
VEDASCLR
NT seq 927 nt NT seq  +upstreamnt  +downstreamnt
atgggcggcaagcacgtagctgttcttttgggtgggttttcgtcggagcggccggtcagc
ctctcgtccgggaacgcttgcgcgctcgcccttgagggcgaggggtacaaggtcacccgg
gtcgatgtggggcgcgatatcgccgccgtactcggcgagctgcgcccggatgtcgccttc
aatgcgctgcatggccccttcggtgaagacggcaccattcagggcattctcgaatatctc
gccattccctatacccattccggcgtgctcgcttctgcacttgccatggacaaggcgcag
gccaagaaagtggctgcggctgccggcattccggtggctgacgaacgcgtcatgaaccgg
ttcgaattcaccagcgaacatccgcttgcgccgccctacgtcgtgaagccggtgcgcgaa
ggctcgagcttcggtgtggtgatcgtcaaggaagaccagtcgcatccgccgcaaatcctt
acctcgtccgaatggcgttacggcgatcacgtcatggtcgagcgttacatccatggtcgc
gaactgacctgcggcgtgctcgacggcgaggcgctaggtgtgacggaagtggtgccgctg
ggtcacaatttctatgattacgacgctaaatacgcagccggtggctcaaagcatgtcatt
ccggcagaaatttcaccaaaaatttaccaaaaaattcaaacactggcggttatggcgcat
cgggcgatcgggtgccgtggcgtaagccgttcagactttcgttacgacgaccgcttctca
gaagatggcgaagttatctggcttgaagtgaatacgcagccgggcatgacgccgacctcc
ctggtgccggaaatggcggcccatgctggccgctcctttggtaaccttgtcagctggatg
gtggaggacgcttcgtgtttgcggtga

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