Agrobacterium tumefaciens H13-3: AGROH133_09020
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Entry
AGROH133_09020 CDS
T01432
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02024
Quorum sensing
agr03060
Protein export
agr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AGROH133_09020 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AGROH133_09020 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AGROH133_09020 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
agr02044
]
AGROH133_09020 (ffh)
Enzymes [BR:
agr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AGROH133_09020 (ffh)
Secretion system [BR:
agr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AGROH133_09020 (ffh)
Eukaryotic Sec-SRP protein
AGROH133_09020 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_30
AAA_33
AAA_22
AAA_19
AAA_31
AAA
AAA_14
6PF2K
APS_kinase
DnaB_C
AAA_18
Thymidylate_kin
AAA_7
AAA_5
GTP_EFTU
ResIII
AAA_16
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ADY65612
LinkDB
All DBs
Position
circular:2662563..2664134
Genome browser
AA seq
523 aa
AA seq
DB search
MFENLQDRLGSILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDKVREKAV
GAAVLKSIKPGQMVVKIVHDELVEMLGTEGVSIDLHAAAPVVIMMVGLQGSGKTTTTGKI
AKRLTDRDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPVIAGQSPTDIAARAVQAAK
LGGHDVVILDTAGRTHIDEPLMLEMADIKKKSNPHEILLVADSLTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGIGERMNELDEFHPRRIADRILGMGDI
VSLVEKAAENIDAEKARAMAEKMAKGKFDLNDLSDQLAQMKKMGGMGGIMGLMPGMAGMK
DKMASAGLNDKMFDRQIAIISSMTKAERANPDILKHSRKKRIAAGSGTDAAEINKLLKMH
RGMADMMKAMGGKGKGGIMKQMMGGLAGKMGLGGMMGGGMPDLSNIDPKQLEALQKQAEA
AGLGKPGAMPGLGGLPGGLPGLGGTKLPGLGGMPGLPGFPKKK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctccaggaccgccttggttccattctgaatggactgaccggccgtggc
gcgctgacggaagccgatgttgccgccgccctgcgcgaggttcgccgtgcgcttctggaa
gcggacgttgcgctggaagtcgtgcgttccttcaccgacaaggtgcgtgaaaaggctgtc
ggcgcagccgttctgaaatccatcaagcccggccagatggtcgtcaagatcgtgcatgac
gaacttgtcgagatgctcggcaccgaaggcgtctcgatcgacctgcatgcggccgccccc
gtcgtcataatgatggtgggtctgcagggttcgggcaagaccacgaccacaggcaagatc
gccaagcgcctgaccgaccgcgacaagaagaaggtgctgatggcatctctcgacacgcgc
cgtccggccgcacaggaacagcttcgccaactgggcgtgcagaccggtgtcgatacgctg
ccggtcatcgccggccagtccccgacagatatcgccgcacgcgccgtgcaggccgccaag
ctcggcggccatgacgtcgtcattctcgacaccgccggccgcacccatatcgacgaaccc
ttgatgctggaaatggccgacatcaagaagaagtccaacccgcatgaaatcctgctggtc
gcggattcgctgaccggtcaggacgccgtcaatctggcgcgcaatttcgatgagcgcgtc
ggcatcaccggtctcgtgctcacccgtatggatggcgacgggcgcggtggtgcggccctc
tccatgcgcgccgtcaccggcaagccgatcaagctgatcggtatcggcgagcgcatgaat
gaactcgacgagttccatccgcgccgtatcgccgaccgtattctcggcatgggcgacatc
gtctcgctggtcgagaaggctgccgaaaacatcgatgcggaaaaagcccgtgccatggcc
gagaagatggccaagggcaagttcgacctcaacgatctctccgaccagcttgcgcagatg
aagaagatgggtggcatgggcggtatcatggggctgatgcccggcatggccggcatgaag
gacaagatggcttccgcaggcctcaacgacaagatgttcgaccgccagatcgccatcatc
tcgtcgatgaccaaggccgaacgcgccaatcccgatatcctcaaacacagccgcaaaaag
cgcatcgccgccggttccggcaccgatgccgccgaaatcaacaagctcttgaagatgcac
cgtggaatggccgacatgatgaaagccatgggcggcaagggcaagggcggcatcatgaag
cagatgatgggcggccttgcgggcaagatggggcttggtggcatgatgggcggcggcatg
cctgatctgtcgaacatcgacccgaagcagctcgaagcgcttcaaaaacaggctgaagct
gccggtcttggcaagccgggcgcaatgcccggtctcggtggtctgcccggcgggctaccc
ggtctgggcgggacaaagctgccgggtcttggcggcatgccgggcctgcccggcttcccc
aaaaagaagtga
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