Agrobacterium tumefaciens H13-3: AGROH133_09817
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Entry
AGROH133_09817 CDS
T01432
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03420
Nucleotide excision repair
agr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AGROH133_09817
03430 Mismatch repair
AGROH133_09817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_09817
Enzymes [BR:
agr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AGROH133_09817
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AGROH133_09817
MMR (mismatch excision repair)
Other MMR factors
AGROH133_09817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
HHH_5
AAA_12
HHH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADY65975
LinkDB
All DBs
Position
linear:241477..243543
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AA seq
688 aa
AA seq
DB search
MAVAYLDKLNEQQRKAVEHGVGLSGGHTAGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAASEMSRRVERICKQVIGANAGALTDAMAWSGTFHGIGARLLRIYAEQI
GLDVDFTIHDREDSADLMNLARHELGFSKTESRFPTKGTCLAIYSRAVNSQTPLKEILRQ
HYPWVSSWEEELKQLFAAYVEAKQAQNVLDYDDLLLYWAQMVSDPDLAGDIGNRFDHVMV
DEYQDTNRLQAAVLMALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPASFSPAADIIT
LDRNYRSTQPILAAANGVIDLARERFTKNLWTERQSLERPKLVTVKSETEQANFIIDQVL
ANRETGMTLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRFA
QNPRDRVAGFRLLQMLPGIGPKKAGNILDTIAADPEPLLALAEIPPPPKTGDDWVSFVQL
LANLRKSQGGWPSDIEQARLWYEPHLERIHEDAETRKADLLQLEQIAGGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLTLSTIHSAKGQEWRSVFILNVVDGCIPSDLGVGSTHEV
EEERRLLYVAMTRAKDSLSLITPQRFFTHGQNAQGDRHVYAARTRFIPATLLQFFETATW
PLVSAAASERSAQQIRIDVGARMRAMWK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcctatctggacaaactgaacgagcagcaacgcaaggccgtggaacatggc
gttgggctttcaggcggacacacggctggaccgttgctgatcatcgccggtgccggttcc
ggcaagaccaatacgctggcgcaccgggtggcgcatctgatcgtcaatggcgccgatcct
cgccgcatcctgctgatgacgttttcacggcgtgccgcttccgaaatgtcgcgtcgtgtc
gagcgtatctgcaagcaggtcatcggcgctaacgccggagccctcacggatgcgatggcc
tggtccggcacgtttcacgggatcggcgcgcgcctcttgcgaatctatgcggaacagatt
ggactggacgtggatttcacgatccacgaccgcgaagacagcgctgatctgatgaacctt
gcccgacacgaactgggtttctccaagaccgagagccgttttccgacaaagggcacctgc
cttgcgatctattcgcgcgccgtcaattcacaaacgccactgaaagaaatcctgcgccag
cactatccatgggtgtccagctgggaagaagagctcaagcaattattcgccgcctatgtg
gaggccaagcaggcccagaacgttctcgattacgacgatcttctgctctactgggcccag
atggtcagcgatcccgaccttgcaggcgatatcggcaatcgtttcgaccacgtgatggtc
gacgaatatcaggataccaaccggctgcaggccgcggtgctgatggcactgaagccgggc
ggtcgcgggttgaccgtggtgggtgacgatgcccagtcgatctattcgttccgggcagca
acggtgcgcaatatccttgattttccggcatctttcagcccggctgccgatattatcacc
cttgatcgcaactatcgctcgacacagccgatactggctgccgccaatggtgtcatcgac
cttgcccgtgagcggttcacgaaaaacctctggaccgaacgacagtcactcgagcggccg
aagctcgtgacagtaaaaagcgaaaccgagcaggcgaacttcattatcgaccaggtgctg
gccaatcgtgagaccggcatgacgctgaagcaacaggccgtgctgtttcgaacctccagt
cacagcgggccgcttgaagttgaacttacacgccgcaatattcccttcgtcaaatttggc
ggcctgaagtttctcgacagtgctcatgtaaaggacatgctggcggtattgcgtttcgcg
caaaacccgcgcgaccgcgtcgccggtttcaggctacttcagatgctgccgggtatcggg
ccgaagaaagccggcaatattctcgatacgattgcggcagacccggaacctctgctcgcc
cttgccgaaattccgccgccacccaaaaccggtgatgactgggtatccttcgtgcagttg
ctggcgaacctgcgaaaatcgcaaggcggctggccatcagatatcgagcaggcgcggctc
tggtacgagccccacctcgaacgcatccatgaggatgccgagacgcggaaggccgatttg
ctgcaactcgagcagattgccggcggctatccttcccgcgaacgcttcctcaccgaactg
acgctcgatccgccggatgccaccagcgatcaggcaggcgtgccgctgctcgatgaggat
tacctgacgctttcaaccattcattcggcaaaaggccaggaatggcgttccgtctttatc
ctgaacgtggtcgatggctgcataccctccgatctgggcgtcggctccacgcatgaagtc
gaagaggaacgccggctgctctatgtcgccatgacgcgcgccaaggacagcctgtcactg
ataaccccgcaacggtttttcacccatggccagaacgcgcagggcgaccggcatgtctat
gccgctagaacccgcttcataccggcaactttgctgcagttctttgaaaccgccacctgg
cccctggtttcggccgcagcctccgagcgcagcgcgcagcagatccgcatcgatgtaggc
gcgcggatgcgggcgatgtggaaatag
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