Agrobacterium tumefaciens H13-3: AGROH133_12859
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Entry
AGROH133_12859 CDS
T01432
Name
(GenBank) probable sarcosine oxidase oxidoreductase protein, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00260
Glycine, serine and threonine metabolism
agr01100
Metabolic pathways
Module
agr_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AGROH133_12859
Enzymes [BR:
agr01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
AGROH133_12859
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
AGROH133_12859
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
DAO
FAD_binding_2
NAD_binding_8
AlaDh_PNT_C
HI0933_like
GIDA
Thi4
Pyr_redox_3
Pyr_redox
FAD_binding_3
Fer2_BFD
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ADY67165
LinkDB
All DBs
Position
linear:1568225..1571185
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AA seq
986 aa
AA seq
DB search
MSGDYRIKGAGRLTPARTARFTFDGKIYQALEGDTVASALLANGVHLIGRSFKYHRPRGF
LSAGPEEPNALIDVSRDSLRKQPNVRATVQDVFDGAIIASQNRFPSLSFDISAINDFLSP
MFAAGFYYKTFMWPKAAWHKIYEPIIRRAAGLGKAPTEPDADHYSGRYAHCDVLVAGGGV
AGLTAALAAAKTGASVILVDENAEVGGALRFDTGAVIDGLSGYDWAQKVFTELKSLPNVR
VLTRTTAFGYYNHNFVALAERVTDHLATPAKHQPRERLWQVRAKKVVLAAGAIERHMVFA
NNDRPGIMLASAARIYLNHYGVTVGNNVGVYTAHDSAYETAFDLKKAGVKIAAIVDCREN
PDRRLLDEARALGIEVLAGHSVYDTSGRLRVSSMSVGRNGGSNKRKIAIDALVVSAGWTP
SVHLFSQSRGKLKFDAANQRFLPDIHVQNCVSVGACNGTDDLAALIAEAAAAGGGAAEFS
GENARAWTGGMIGAAEGAGEGTGVKAFIDFQHDVCAKDIRLAVREGMHSVEHIKRFTTNG
MASDQGKMSNMHGLAIASEALGRDLPKVGLTTFRQPYTPVTFGTLINHSRGALFDPTRKT
PMHDEEAAAGALFEDVGNWKRAWFFPRGGEDMHEALNRECKTVRTSVGVFDASTLGKIEV
VGPDAAKFLNLIYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLSEDRFHVTTTTGGA
PRVLQHMEDYLQTEFPELNVWLTSATEQWAVIAVQGPKAREVIAPFVEGIDISPEAFPHM
AVAEGTFCGVPTRLFRVSFTGELGFEINVPADYGAAVWTAIRERAEAVGGCLYGTETMHI
LRAEKGYIIVGQDTDGTVTPDDAGLAWAVSKKKTDFVGIRGLKRPDLMRSGRKQLVGLKT
KDRLTVPEEGGQIVADPNQPKPMTMLGHVTSAYWSENLGHSIAFALVADGRARMGETLYI
PLADKTIAVEVTDMVFLDKEGARLNG
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgattatcgtatcaagggcgccggtcgcctgacacctgccagaacggcacgc
ttcaccttcgacggcaagatctatcaggcgctggaaggcgacacggttgcatccgcactt
ctggcgaatggcgtgcatctgattggccgttcgttcaaatatcaccgcccgcgtggtttc
ctttccgccggcccggaggagccgaatgcgctgatcgacgtatcgcgtgacagcctgcgc
aaacagccgaatgtgcgcgccacggtgcaggatgtattcgacggcgccatcatcgcctcg
cagaaccgctttccgtcgctgtccttcgatatcagtgcgatcaacgatttcctgtcgccg
atgtttgcggctggtttctactataagaccttcatgtggccgaaggccgcgtggcacaag
atttatgaaccgatcatccgtcgcgcagccggtctcggcaaggcgccgaccgagccggat
gcggatcattattccggccgctatgcccattgcgacgtgctggtggccggcggcggtgtg
gccgggctgacagcggcgctcgccgctgcaaaaactggcgccagcgtcattctggttgat
gagaatgccgaagttggcggcgcgctgcgttttgataccggtgcggtcatcgacggcctg
tccggatatgactgggcgcaaaaagttttcaccgaactgaaatcgctgcccaatgtgcgt
gttctgacccgcacgacagcgttcggttattacaaccacaatttcgtggcgctggccgag
cgtgtgaccgatcacctcgccacgccggccaaacaccagccacgtgaaagactgtggcag
gtccgcgccaagaaagtcgttctggcggcaggcgcgatcgagcggcacatggtctttgcc
aataatgatcgtcccggcatcatgctggcttctgctgcgcgcatctatctcaaccattac
ggcgtgaccgtcggcaataatgtcggtgtctacactgcccatgattctgcctatgagacg
gcattcgatctcaagaaagcgggtgtgaagatcgccgctatcgtggattgccgcgagaac
cccgatcggcggctgctggacgaggcgcgggcgctgggcatcgaggtactggcgggtcac
agtgtttacgatacgtcagggcggctgcgcgtttcttccatgagcgttggccgcaatggc
ggctctaacaagcgcaagattgccatcgacgcgctcgtcgtttcggcgggctggacgcct
tcggtgcatctcttctcgcaatcgcgcggcaagctgaagtttgacgcggcaaaccagcgg
ttcctgcctgacatccatgtgcagaattgtgtgtcagtcggcgcctgcaacggcacggac
gatctcgccgcattgatcgccgaggctgctgccgcaggcggcggtgcagcggaattctcc
ggcgagaatgcgcgcgcctggaccggcggcatgatcggcgctgcggaaggggcaggcgaa
ggcaccggcgtcaaggccttcatcgatttccagcacgatgtctgcgccaaggatattcgc
ctggccgtgcgtgaaggcatgcattcggtcgagcatatcaagcgcttcaccaccaatggc
atggcgtccgatcagggcaagatgtccaacatgcatggccttgccattgcctcggaagcg
cttgggcgggatctgccgaaggtcggtctcaccactttccgccaaccctacacgccggtc
accttcggcacgctcatcaaccattcgcgcggtgcgctgttcgacccgacccgcaagacg
ccgatgcatgacgaagaggctgcggcaggcgcccttttcgaggatgtcggcaactggaag
cgcgcatggttcttcccgcgcggcggagaggatatgcacgaggcgctcaaccgcgaatgc
aagacggtgcggacaagcgtcggcgtgttcgatgcctccacgctcggcaagatcgaggtg
gtcggccccgatgcggctaagttcctgaacctcatctacacaaatgcctgggacacactg
aaacccggccgttgccgctatggcatcatgacgcgcgaggacggtttcgtttacgatgac
ggtgttgtcggtcgtctttccgaggaccgtttccacgtgacgacgacgacgggcggcgca
ccgcgcgttctccagcacatggaggattatctccagaccgaattccccgagctgaatgtc
tggctgacatcggcgaccgaacaatgggcggtgattgcggtgcagggaccgaaagcgcgc
gaggtgatcgcgcctttcgtcgagggtatcgatatttcgcccgaagccttcccgcatatg
gcggtcgcggaaggcaccttctgcggtgtgcccacgcgtctcttccgtgtatcattcacg
ggtgagcttggtttcgaaatcaacgttccggccgattacggcgctgccgtctggaccgcg
atccgtgaacgggccgaagcggtgggcggatgcctttatggcaccgagaccatgcacatc
ctgcgtgccgaaaagggttacatcatcgtcggacaggataccgacggcaccgtgacacct
gacgatgcggggcttgcctgggccgtttccaagaagaagacggatttcgtcggtattcgc
ggtctgaaacgcccggatctcatgcgctccggtcgaaagcagcttgtgggcctcaagacg
aaggaccggctgactgttcccgaagagggtggccagatcgttgctgatccaaaccagccg
aaacccatgaccatgctcggccatgtcacttccgcctactggtcggaaaatctcggccac
tccatcgcctttgcgctggtggcggatggcagggcgcgcatgggcgaaacgctctacatc
ccgcttgccgataaaacaattgccgtcgaagtgaccgacatggtcttcctcgacaaggaa
ggagcccgtctcaatggctga
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