Agrobacterium tumefaciens H13-3: AGROH133_14062
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Entry
AGROH133_14062 CDS
T01432
Name
(GenBank) ECF family sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agr03021
]
AGROH133_14062
Transcription machinery [BR:
agr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AGROH133_14062
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GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_28
Sigma70_r4
HTH_29
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADY67651
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All DBs
Position
linear:2117748..2118272
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AA seq
174 aa
AA seq
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MAKHAVSGVSGNTLNDSQLEVLRIGIADLAPALTAFARRFVRNEEDVDDLVQETMLRGLR
SLHGFTPGTALKSWLFTILRNTFCTRYKVSKRECVGLPVGIEQTMSTPASQEWRVQHQEV
MRAIRDLDKDQKKALLLVAGGTSYSDAAAICGCRVGTIKSRVNRARESLRRNLD
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcacgctgtgagtggagtttccggaaacacattaaatgattcgcagctggag
gtgttgcgtatcggtattgcagatctggcgccggccttgacggcttttgcccgccgcttc
gtcaggaatgaagaggatgtcgacgatctcgttcaagagacgatgttgcgaggactgcgg
tccctgcacggttttacgcccggcacggctttgaaatcgtggctcttcaccattttgcgc
aacacgttctgtacccgctacaaggtgtctaaacgcgaatgtgtaggcttgcccgttggt
atcgagcagaccatgtctacccctgccagccaggaatggcgtgtgcagcatcaggaagtc
atgcgggctatacgggatctcgacaaggatcagaaaaaagctcttctgcttgtcgccgga
gggacgagttactccgatgccgcggccatttgcggctgccgggtgggcaccatcaaaagc
cgggtgaacagggcaagggaatcgcttcggcgcaatcttgactaa
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