Aphis gossypii (cotton aphid): 114120955
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Entry
114120955 CDS
T05869
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03420
Nucleotide excision repair
ags04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114120955
09124 Replication and repair
03420 Nucleotide excision repair
114120955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ags03051
]
114120955
03400 DNA repair and recombination proteins [BR:
ags03400
]
114120955
Proteasome [BR:
ags03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
114120955
DNA repair and recombination proteins [BR:
ags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
114120955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
Rad60-SLD_2
Crinkler
Dsc3_N
N_formyltrans_C
Ubiquitin_2
UBA_2
CUE
Motif
Other DBs
NCBI-GeneID:
114120955
NCBI-ProteinID:
XP_027838875
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MLITFKNLQQQTFKLEIDSDQTVRQLKEKLQAEKGSEYLAENQKLIYAGKILSDDTKISD
CNIDSKKFVVVMVSKAAGAASTSSATNVAGTSSASSIVTKPSPSSSTSQKPAEKSPLPVE
QPRVEEQSTSPVIESPASEITSDDEYERVVQNVMDMGYERSQVENALRASFNNPDRAVEY
LLTGIPDELQADPTINQSMSSLLSEDTGSSTGSSQVPQADPLAFLRNQPTFQQMRSVVQQ
NPELLNSVLQQIGQTNPALLQMISNNQEAFVRMLNEPNEGAGAGAAAAPAAAGRGPGGYD
VPVSPQDKEAIDRLKALGFPEHQVVQAYFACEKNENMAANLLLTQEPDD
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcacattcaaaaatttgcaacagcaaacattcaaactggaaattgattccgat
caaacggtaagacagttaaaggaaaaactgcaagctgaaaaaggatctgaatatttggca
gaaaaccaaaaattgatatatgcaggaaaaattcttagtgatgatactaaaataagtgat
tgtaacattgactcaaaaaaatttgtggtggttatggtttcaaaagcagctggtgctgct
agtacttctagtgcaactaatgttgctggtacttctagtgcctcaagcattgttactaaa
ccaagtccatcaagttctacatctcagaaaccagcagagaaatctcctttaccagttgaa
caacccagagttgaagagcaatcaacctcaccagtgatagaatcacctgcatcagaaatt
acatctgatgacgaatatgaaagagtggttcaaaatgttatggatatgggatatgaacga
tcacaggttgagaatgctctcagagctagttttaataatccagacagagctgttgaatat
ttacttactggaatacctgatgaacttcaagctgatccaactattaatcaatctatgagt
agcctactcagtgaagacacaggtagctcaactggtagtagccaagttccccaagctgat
cctttagcttttttgcgcaaccagccaacatttcaacaaatgcgttctgttgttcagcaa
aatcccgaattattaaactctgtactgcaacaaattggtcaaaccaacccagcactattg
caaatgatatctaataatcaagaagcatttgttcgcatgttaaacgaaccaaatgaaggt
gctggtgctggtgctgcagcagcaccagcagctgctggtagaggaccaggaggatatgat
gtgcctgtatctccacaagacaaagaagccatagatagattgaaagcgttaggttttcca
gaacaccaagttgtgcaggcatattttgcatgtgagaagaatgaaaatatggctgcaaat
ttattattgacacaagaacctgatgattaa
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