Aphis gossypii (cotton aphid): 114123286
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Entry
114123286 CDS
T05869
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ags03041
]
114123286
03009 Ribosome biogenesis [BR:
ags03009
]
114123286
Enzymes [BR:
ags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114123286
Spliceosome [BR:
ags03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114123286
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
90S particles
Helicases
114123286
Pre-60S particles
114123286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
AAA_30
AAA_22
DUF5301
Motif
Other DBs
NCBI-GeneID:
114123286
NCBI-ProteinID:
XP_027842003
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MSDDKSLPGSSLELKIMAEDRKFSSLEGHVCENTLKGIEDMGFTVMTEIQAKTIPPLLEG
RDLVGAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGCIIISPTRELSMQTYGVLKELMK
HHHHTYGLMMGGANRQTEATKLSKGINIVVATPGRLLDHLQNSPDFLYKNLQCLIIDEAD
RILDIGFEEEIKQIINLLPKRRQTMLFSATKTPKTDALTTFALKKEPIYIGVDDSKDEAT
VDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCLAVKYFHELLNYIDLPVMCIH
GKQKQERRTTTFFQFCNAETGILLCTDVAARGLDIPLVDWIVQFDPPDDPKEYIHRVGRT
ARGEGSSGHALLILRPEELGFLQYLKKAKVPLNEFDFSWNKISDIQLQLEKLVAKNYFLH
ISAKEAFKSYVRAYDSHHLKQIFDVGTLDITKVAASFGFTTPPAVELNAKAVRPRKRHGG
GGLGKFNNMNKGDKKVFKFVQPPEKKKKRNK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgacaaatcacttccaggttccagcttggaattgaaaataatggctgaagac
agaaaattttctagtcttgaaggccatgtatgtgaaaatacattaaaagggatagaagac
atgggatttacagtgatgactgaaattcaagcaaaaactataccaccattattggaggga
cgtgatttagtcggagctgcaaaaactggcagtggaaaaacattggcttttttaatacct
gctgtagaattaatttacaaacttaagttcatgcccagaaatggtactgggtgtataatt
atatcccctaccagagaattatcaatgcagacttatggtgtgttaaaagaattgatgaaa
caccatcatcacacctatggtctgatgatgggaggtgcaaacagacaaactgaagctaca
aaattgtctaaaggcataaatatagttgtagccacccctggaagattattagatcactta
caaaattctccagattttctttacaaaaatcttcagtgtcttattattgatgaagctgat
cgtattttggatattggatttgaggaagaaataaaacaaataataaatttattacctaaa
cggagacaaacgatgttattcagtgccactaaaacacctaaaactgatgcattaactaca
tttgcattgaaaaaagaaccaatttatattggagtggatgacagtaaagacgaagctaca
gttgatggtttagaacaaggatatgttgtatgtccatctgaaaaacgattcttattgttg
tttacatttttaaaaaaaaatagaaagaagaaagttatggtattcttcagctcatgttta
gcagtcaaatatttccatgaattattgaattacatcgatttgcctgttatgtgcatacac
ggtaaacaaaaacaagaaaggcgaacaactacatttttccagttttgtaatgcagaaact
ggtatattgttatgtactgatgtagctgccaggggattggatattccattggttgattgg
attgttcagtttgatcctcctgatgatcctaaagaatatattcaccgtgtgggacgtacg
gctcgaggtgaaggtagcagtggacatgctttattaattttacgtcctgaagaattagga
tttttacaatatttaaaaaaagcaaaagtaccattaaatgaatttgatttttcttggaat
aaaatatcggatatacaactacaacttgaaaaacttgtagctaaaaattatttcttgcat
atatctgcaaaagaagcatttaagtcttatgttcgggcttatgattcacaccatctaaaa
caaatatttgatgttggcactttggatattacaaaagtcgcagcttcatttggatttact
acacctccggccgtagaattaaatgcaaaagcggttcgtccacgaaaacgacatggtggt
gggggtttgggaaaattcaataatatgaataaaggtgataaaaaagtatttaaatttgta
caacctccagaaaaaaagaaaaaaagaaataaatga
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