Agrobacterium sp. 33MFTa1.1: EYD00_04705
Help
Entry
EYD00_04705 CDS
T05906
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt03030
DNA replication
agt03430
Mismatch repair
agt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EYD00_04705
03430 Mismatch repair
EYD00_04705
03440 Homologous recombination
EYD00_04705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agt03032
]
EYD00_04705
03400 DNA repair and recombination proteins [BR:
agt03400
]
EYD00_04705
Enzymes [BR:
agt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EYD00_04705
DNA replication proteins [BR:
agt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EYD00_04705
DNA repair and recombination proteins [BR:
agt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EYD00_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QBJ12753
LinkDB
All DBs
Position
circular:924544..928044
Genome browser
AA seq
1166 aa
AA seq
DB search
MGDTVVRAETSDENLNTPGFVHLRVHSAYSLLEGALPLKKIMSKAVSDGQPAIAITDTNN
LFVALEFSEKARDEGLQPIIGCQLSIDMQDAAEDRRNHNSHLQKLPAIVLLAADAEGYER
LVDLVSRAYLEGEGSGHSVHITRAWLEEDSNAGLIALTGASGGPVDMALREGHAAQAKER
LLTLKSLFGDRLYIELQRQSGYDRSHERRMIGLAYDHDIPLVATNEAFFPSKADYEAHDA
LMAVAHNAIVSDDSRFRLTPDHYLKSREEMTALFADLPEALDNTVEIALRCSYVLKKRGP
ILPRFTGASDDPEAAERAEAEELRRQAVEGLDQRLAALGMAPGYTEQDYRERLDFELGVI
SRMKFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFL
NPERVSMPDFDIDFCQDRREEVIRYVQAKYGREQVAQIITFGSLQARAALRDVGRVLEMP
YGQVDKICKLVPNNPANPTPLSKAIEEEPRLQEEADREPVVARLLDIAQKIEGLYRHAST
HAAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVESAGLVKFDFLGLKTLTVLKVAVD
FVAKRGIKVDLAAIPLDDAKTYEMLSRGETIGVFQVESAGMRKALIGMRPDCIEDIIALV
ALYRPGPMENIPVYNARKHGEEELESIHPTIDHLLKETQGVIVYQEQVMQIAQVLSGYSL
GEADLLRRAMGKKIKEEMDKQRERFVDGAIKNGVSKPQADTIFDLLAKFANYGFNKSHAA
AYAIVSYQTAYMKAHYPVEFLAASMTLDMANTEKLNDFRQDAGRLGIEIVAPSVQTSFRQ
FETGENRIYYSLAAIKGVGEGAVEHIVAIRGDKPFTSLEDFCLRIDPKQINRRVLESLIN
AGAFDCFGRDRAELIGGLDRIIGYAQMAQNNRTIGQSDMFGSGGGNGPEKLVLPAFQPWL
ASEKLLREYQVLGFYLTAHPLDTYRPVLEKLRVQNFADFSAAVKQGATAGRLAGTVTGKQ
ERKTRTGNKMGIVTFSDASGQYEAVLFSEGLGQYRDLLEVGKSLVITVQAEERPEGIGLR
IQTAQSLEEKSVQMQKALRVYVRDSGPLKTVARHLNTRGDGSVYFIVIKDEGSREIEVEL
TEKYRISPEIAAALRSAPGVVDVELV
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatacggttgtgcgggcagaaacctctgacgaaaacctgaacaccccgggtttc
gttcatcttcgggttcattccgcttactccctgcttgaaggggctctgcccctcaagaaa
atcatgtccaaggcggtttcagacggccagccggccattgccattacagataccaacaac
ctcttcgttgcgctggagttttccgaaaaggcgcgggatgagggtttgcagcccatcatc
ggctgccagctgtcgatcgacatgcaggatgcggcggaggatcgccgcaaccacaacagc
caccttcagaaacttcccgctatcgttcttctcgccgccgatgccgaagggtatgagcgg
ctggtggatcttgtgagccgtgcctatcttgagggcgagggcagtggccattccgtgcac
attacccgcgcatggctggaagaggactcaaatgcgggcctgatcgcgctgaccggcgct
tccggcggcccggtggatatggccttgagggaaggtcatgccgcccaggcgaaggaacgg
ctgctgacactgaagtcactcttcggtgaccggctttatatcgaattgcagcgccagtcc
gggtatgaccgttcgcatgagcggcgtatgatcggcctcgcttatgaccatgatattccg
ctggttgccacaaacgaggcgttcttcccgtcgaaggccgactacgaagcgcatgacgcg
ctgatggcggtggcgcataatgccattgtttcggacgacagccgctttcgcctgacgccc
gaccattaccttaaaagtcgagaagaaatgacggcgttgtttgcagacctgccggaggcg
ctggacaataccgtcgagattgcgttgcgctgctcttatgtgctgaagaagcgcgggccg
atcctgccacgtttcaccggcgccagcgacgatcctgaggcagcggaacgcgccgaagcg
gaagagcttcgacgtcaggcggtggaggggctggatcagcgccttgccgcgctcggtatg
gcgcccggttatacggaacaggattatcgcgagcggctcgatttcgaactcggcgtcatc
tcgcgcatgaagttccccggttatttcctgatcgttgccgacttcatcaaatgggccaag
cagcacgatatcccggtcggaccgggccgtggttcgggcgcgggttcgctcgtagcttac
gcgctgacgattaccgatgtcgatccgctgcgtttctcactgctgttcgaacgcttcctt
aatcctgaacgcgtgtcgatgcccgacttcgacatcgatttctgccaggatcgtcgcgaa
gaagtgatccgctacgttcaggccaaatacggccgcgagcaggtggcgcagatcatcacc
ttcggttcgctccaggcgcgcgcggccctgcgcgacgtcggccgcgtgctggaaatgccc
tacgggcaggtggacaagatctgcaagctggtgcccaacaacccggccaacccgacgccg
ctttcgaaggcgatcgaggaggagccgcgcctgcaggaagaagcggacagggagcctgtt
gtcgcccgcctgctggatatcgcccagaagatcgaggggctttatcgccacgcctcaacc
catgctgccggtatcgtcatcggcgaccgcccgctgtcgaagctggtgccgatgtatcgc
gatccgcggtccgatatgccggtcacccagttcaacatgaagtgggttgaaagcgccggc
cttgtcaaattcgactttcttggcctgaaaacgctgacggtgctgaaggtggccgtcgat
tttgtcgccaagcgcggcatcaaggtggatctcgccgccatcccgctcgatgacgccaag
acgtatgaaatgctgtcgcgcggtgagaccatcggcgtgttccaggtggaaagtgccggc
atgcgcaaggcgctgatcggcatgcggccggactgcattgaggacattatcgctctggtg
gcgctatatcgtcccggcccgatggagaacatccccgtttataacgcccgcaaacatggc
gaagaagagctggaatcgatccacccgaccatcgaccatctgctgaaggaaacacagggc
gttatcgtttatcaggaacaggtgatgcagatcgcccaggttctgtcgggttattcgctt
ggcgaagccgatcttctgcgccgcgccatgggtaagaagatcaaggaggaaatggacaag
cagcgcgagcgcttcgttgatggcgccatcaagaacggtgtctcgaaaccgcaggccgac
accatcttcgatctcctcgcaaaatttgccaattacggcttcaacaagagccatgccgcg
gcctatgccatcgtctcctaccagacggcctatatgaaggcgcattatccggtggagttc
ctggcggcctccatgacgctcgatatggccaatacggaaaagctcaacgatttccgtcag
gacgccggtcgtctcggcattgaaatcgtcgcgccgtccgtccagacctcgttccgccag
ttcgaaacgggcgagaaccgcatttattattcgttggctgccatcaagggggttggcgaa
ggagcggtcgaacatatcgtcgcgatccgcggcgacaagccgttcacgagcctcgaggat
ttctgcctgcgcatcgaccccaagcagatcaaccgtcgtgtgctcgagagtctcatcaat
gccggtgctttcgattgtttcggccgcgaccgcgcagagttgatcggcgggctggaccgt
atcatcggttatgcccagatggcgcagaacaaccgcaccatcggccagtcggacatgttc
ggctcgggcggcggcaatggcccggaaaagctggtgcttcctgccttccagccctggctt
gcctcggaaaagctgctgcgcgaatatcaggttctcggtttctacctcacggcccacccg
ctggatacctatcgccccgtactggaaaaattgcgcgtgcagaatttcgccgatttttcc
gctgctgtgaaacagggagcgactgccgggcgtcttgccggcaccgttaccggcaaacag
gagcgaaagacgcgcaccggcaacaagatgggtatcgtcaccttctcggatgcttcaggg
caatatgaggcggtgttgttttccgaaggtctcggccagtaccgcgacctgcttgaggtc
ggcaagtcgttggtgatcacggtgcaggcggaagagcgccctgaaggtatcggtctgcgc
atccagacggcgcagtcgctggaagaaaaatccgtgcagatgcagaaggcactgcgtgtt
tatgtgcgtgattccggcccgctgaaaacggttgcccgccacctcaacaccaggggtgac
ggctcggtctatttcatcgttatcaaggatgagggtagccgcgagatcgaggtggaactg
acggagaaataccgtatctcgcctgaaatagccgctgctcttcggtcagcccccggtgtc
gttgatgtggaactggtgtga
DBGET
integrated database retrieval system
