Agrobacterium sp. 33MFTa1.1: EYD00_19840
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Entry
EYD00_19840 CDS
T05906
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agt03016
]
EYD00_19840
Enzymes [BR:
agt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EYD00_19840
Transfer RNA biogenesis [BR:
agt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EYD00_19840
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QBJ15681
LinkDB
All DBs
Position
linear:complement(1306330..1306956)
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AA seq
208 aa
AA seq
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MAAPIRYHEGDISAEDAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGTADIIRIAAG
QKEAPNLVRMLADPAHQKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLTRTYTDRHGL
KDNLKEMLEVDISKAQQSSDWAAQTLSPAQLEYAASDVLYLHALRDKLTARLIRDGRLDH
ADACFAFLPTRAKLDLLGWDETDIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacccatccgttatcacgaaggcgatatttccgccgaagatgccgcgcgctat
accggcgccatcgccatcgatacggaaacgctgggtctggtgccgcgtcgcgaccgcctc
tgcgtcgtccagctttcgccgggcgacggcacggcagacatcatccgcatcgccgctggg
cagaaagaagcgccgaacctcgtgcgcatgcttgccgatcccgcccaccagaagatcttt
cactatggccgtttcgatatcgccgtgctttttcatacgttcggtgtgacgaccacgcct
gtcttctgcaccaagatcgcttcacggctgacccgcacctatacggaccggcacgggctg
aaggacaacctcaaggaaatgctggaggtcgatatttccaaggcgcagcaatcttcggac
tgggcagcgcaaacgctttccccggcgcagctcgaatatgccgcttccgacgttctttat
ctgcatgcgctgcgcgacaagctgacggcgcgtctcatccgcgacggccgccttgatcat
gccgatgcctgtttcgcgtttttaccgacccgtgcgaagctagacctgctcggctgggac
gaaaccgacattttcgcccatagctga
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