Archaeon GW2011_AR10: QT03_C0001G0851
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Entry
QT03_C0001G0851 CDS
T03835
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
agw
Archaeon GW2011_AR10
Brite
KEGG Orthology (KO) [BR:
agw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agw03016
]
QT03_C0001G0851
Enzymes [BR:
agw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
QT03_C0001G0851
Transfer RNA biogenesis [BR:
agw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
QT03_C0001G0851
Prokaryotic type
tRNA splicing ligases
QT03_C0001G0851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Intein_splicing
LAGLIDADG_3
Toluene_X
Motif
Other DBs
NCBI-ProteinID:
AJF60338
UniProt:
A0A0B5HT87
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All DBs
Position
778480..781449
Genome browser
AA seq
989 aa
AA seq
DB search
MAGFEVHGYKVGKLNDYSWEIPVSVKQGMNVPARIFASEKLLKEMDPGVFDQITNVACLP
GIQKAAMAMSDAHWGYGFPIGGVAAFDLEEGIISPGGIGFDINCIYGGAKILSEFGYTKN
MIDFEGLWQKEIIKCSDFSNEVTGTTINAFMKSLGKKAYKITTETGKEIIASSDHRFYTK
NGMKKVSEMENGFVAVFPFEGNEFEKPKQKLLVDEKIIRKAYKGNENGFNQIIKFLKGRG
LLPIYLDSEKLPYLAKICGFVQGDGTLQFFKKGDAAAHFYGKKEDLETIKADIKKLGFES
QIYSRNRHHKFETYYGISQFDYLEHSLHCSSTAFALLLKCLGCTAGNKVKQEWFVPEWIL
SSTKWLKRLYLAAFFGAELTTPKTVTRHGYNFYNPTLSLNKKLELRESGWKLLGQIQSML
DEFCVASSTIAEREEFTNKIGEISVRQRLQVSAEPENLIRFWSRIGFEYNAEKTFLANAA
IAYLQIKEMVIEQREKSSQIAIELKQQGFTLKEVHEQIGNEFVNERFIARSIWGGRKTGA
RVASKFRKFDEFIKERIKGLGKTGFVWEKVASIEETEFNDYLYDFNVANENHNFIANGFL
SSNCGMRLVLTDLTAKEVQPKIKELVNTLFEKVPVGVGRKGSVKLDRKNFDELMVEGVNW
CIENGYGWEEDAKKIEEHGAIKGANPGKVSEKARQRGISQLGTLGSGNHYLEVQLAHAEN
IFDAKAAKALGIHSPEQVVVMVHCGSRGFGHQIATDYLVVFEKAMQKYGINVKDRQLACA
PFNSKEGKDYYSAMVCAANSAFCNRQVIVHQIRESFKEVFRQDPEKMGMHIVYDVAHNIA
KVEEHVVEGKKKKLVVHRKGATRSFAPGHEELWGVYKEIGQPVIVGGSMETGSYVCVGTQ
KAMDETFGSTMHGSGRTMSRAKAKKIVRGDTLQKDMEKRGIYVKAASYSGLAEEAGLAYK
NISEVVDSMDKLGVSRKVAALSPIGNIKG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
ttggctggatttgaagtgcatggctataaagtaggcaagctgaatgattatagctgggag
attcctgtttcagtaaagcaaggcatgaatgttcctgcaaggatttttgcttcagagaaa
ctgctgaaagaaatggatccgggggtttttgatcagataactaatgtcgcttgcttgccc
ggaatacagaaggcagcaatggcaatgagtgacgcgcactggggctacggttttccgatt
ggaggagtggcagcatttgacttggaggaaggaattattagtcctggcggaatcggtttt
gatattaactgcatttatggcggcgccaaaatcctcagcgaatttgggtacacaaaaaac
atgattgattttgagggtttatggcagaaagaaataataaagtgcagtgatttttcaaat
gaagttacaggaacaacaattaatgcatttatgaagagccttggaaagaaagcctataaa
ataaccacggaaacaggaaaggaaataattgcttcatccgaccatcgcttttacacgaaa
aatgggatgaaaaaggtttcagaaatggaaaatgggttcgtggctgtttttccttttgag
ggaaacgagttcgaaaagccaaaacaaaagcttcttgttgatgaaaagattattaggaaa
gcatacaagggcaatgaaaatgggtttaaccagataataaaattccttaaaggcagaggg
cttctgccgatttatttagacagcgaaaaacttccttatcttgcaaaaatttgcggattt
gttcaaggcgatggtacgctacaattcttcaagaaaggggatgccgcagcccacttctat
ggaaaaaaagaggatttggaaacaatcaaggcagatatcaaaaagctgggctttgaatcg
caaatatactcaagaaataggcaccacaagtttgaaacttattacggaatctcgcaattc
gattacttagagcattcgcttcattgcagttcaacagcatttgcattgctcctgaaatgc
cttggctgtacggctggaaacaaggttaagcaggaatggtttgttccagagtggatttta
agttctacaaagtggctgaaaaggctttatcttgctgccttttttggcgcggagcttacg
acaccaaaaacggttacaaggcacggctacaacttttataatccaaccctttcactcaac
aaaaaactggagttaagggaaagcggctggaaacttttggggcaaatacagtcaatgtta
gatgaattctgcgtggcaagctcaacaatagctgaaagagaagaattcacgaataagata
ggagagatttctgtgaggcaaaggctgcaggtttcggcagagccggaaaatctgattagg
ttttggagcagaataggttttgagtataatgcagaaaaaactttccttgccaatgcagca
atagcttaccttcagattaaggaaatggtgatagaacagagggagaaaagctctcagatt
gcaatagagctgaagcagcagggcttcaccttgaaagaggttcatgaacaaattggaaac
gagtttgttaatgaaagattcattgcaagaagtatttggggagggaggaaaaccggggca
agagttgcgtcaaaattccgaaaatttgatgaattcataaaagaaagaataaaagggtta
ggaaaaacagggtttgtttgggaaaaggttgcctcaatagaagaaacagaattcaatgat
tatctgtatgactttaacgttgcgaatgaaaaccacaattttatcgcaaacggtttcctt
tcaagcaactgcggcatgcggctggttttgactgatttaacagcaaaagaagttcagccg
aaaataaaggagcttgttaatactttgtttgaaaaagttcctgtcggggttggaagaaag
ggttcagtgaaacttgacaggaaaaattttgatgagctgatggtggaaggagtcaactgg
tgcattgagaacggctatggatgggaggaagacgcaaaaaaaatcgaggagcatggagca
ataaagggagcaaatccagggaaggtgagtgagaaggcaaggcagcgcggcataagccag
cttggaactttaggaagcggtaaccactacttggaggtgcagcttgctcacgctgaaaac
atttttgatgcaaaggcagcaaaagctctcggcattcattcgccagagcaggttgtggtg
atggtgcattgcgggagcaggggctttgggcaccaaattgcaaccgattatcttgtagta
tttgagaaggcaatgcagaaatatggcattaacgtgaaagacaggcagcttgcctgtgcg
ccattcaacagcaaggaaggaaaagactattattctgcaatggtctgtgctgcgaacagc
gctttctgcaacaggcaggttatagtgcaccaaataagggaaagctttaaggaagtgttc
aggcaagatcctgagaaaatggggatgcatattgtttatgatgtggcacacaacattgca
aaagtggaagagcatgtagttgagggaaaaaagaaaaagcttgttgttcacaggaaaggt
gcaacaaggagctttgccccgggtcacgaggaactgtggggggtttacaaggaaataggg
cagcctgtaattgtaggcggcagcatggaaacaggttcttacgtatgcgttggaacacaa
aaagcgatggatgaaacttttgggagcacaatgcatggaagtggaagaacaatgagcagg
gcaaaagcgaaaaaaattgtgcgaggggataccctgcagaaggacatggagaaacgcggc
atctatgtaaaggctgcttcatactcaggattagcagaagaggcaggacttgcttacaaa
aatatttcagaggttgttgactcaatggataaactaggggtaagtagaaaagttgctgca
ttaagccccatagggaacataaaaggctga
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