Actinoalloteichus hoggarensis: AHOG_23985
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Entry
AHOG_23985 CDS
T04975
Symbol
ykoV
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
ahg
Actinoalloteichus hoggarensis
Pathway
ahg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ahg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AHOG_23985 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahg03400
]
AHOG_23985 (ykoV)
DNA repair and recombination proteins [BR:
ahg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AHOG_23985 (ykoV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
SRP-alpha_N
Motif
Other DBs
NCBI-ProteinID:
ASO22403
UniProt:
A0A221W9V6
LinkDB
All DBs
Position
complement(5665439..5666539)
Genome browser
AA seq
366 aa
AA seq
DB search
MRSRRGTSIQVDMRSMWRGAISFGLVNVAVRLYAATEDHDYHFFQLHRKDHGRIRYKRVC
TVCGEEVAFDEIAKGYEMDDGRLVVLEQEDFARLPITTERSIQVLEFVPVESVDPIYFQR
SYLLEPENPSVRPYVLLRDALERVGRLAVVKITLRQRETLAMLRARDDVIVLHTMLWPDE
IRPAEFEFLGQDVPVRPQELDMATSLIENMTGEFDPTEFSDDYQRLLGQLIEARAAGAEV
PAGPQEEPEGGDVIDLMTALERSIAQARSGDETTKEKERTGRRSTGRKQPSGGGRTTTKT
GSDSRAKSGSTKAGSAKTASAKSGSAKAASAKAESAGDDVEADTKAAQGDKGRTSRRKTA
GRRRSA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgatctcgtcgaggcacgagtatccaggtggacatgcggtcgatgtggcgaggagcg
atctccttcgggctggtcaatgtggctgtccggctctacgccgccaccgaggaccacgac
taccatttcttccagttgcatcgaaaagatcatggccggattcgctacaagcgggtgtgc
accgtgtgtggcgaggaggtcgcgttcgatgagatcgccaagggctacgagatggacgac
ggcaggctggtcgtgctcgaacaggaggacttcgcccggctgccgatcaccaccgaacga
tccatccaggtgctggagttcgtgccggtggagagcgtggacccgatctacttccagcgc
agctacctgctggagccggagaacccctcggtgcggccctatgtcctgctgcgggacgcc
ctggaacgggtcggccgcctcgccgtcgtcaagatcacgctgcggcagcgtgagaccctg
gcgatgctgcgggccagggacgacgtgatcgtcctgcacaccatgctgtggcccgacgag
atccggcccgccgagttcgagttcctgggccaggacgtgcccgtccgcccgcaggagctc
gacatggccacgtcgctgatcgagaacatgaccggcgagttcgatccgaccgagttctcc
gacgactaccagcggctcctcggtcagctgatcgaggccagggcggcgggtgccgaggtg
cccgccggaccgcaggaggagcccgagggcggcgacgtcatcgacctgatgaccgcgctg
gaacgcagcatcgcccaggcccggtcgggggacgagacgacgaaggagaaggagcggacc
gggcgccgttcgaccggccggaagcagccttcgggcggcggccggacgaccacgaagacc
ggctcggacagccgggcgaagtcgggttcgacgaaggcgggctcggcgaagacggcgtcg
gcgaagtcgggttcggcgaaggcggcgtcggcgaaggccgagagcgcgggcgacgacgtc
gaggccgacaccaaggccgcccagggggacaagggacggacgtctcggcgcaagaccgcc
gggcgcagacgctcggcctga
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