Aeromonas hydrophila AH10: VU14_08155
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Entry
VU14_08155 CDS
T03886
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
ahi
Aeromonas hydrophila AH10
Pathway
ahi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VU14_08155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahi03019
]
VU14_08155
Enzymes [BR:
ahi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
VU14_08155
Messenger RNA biogenesis [BR:
ahi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VU14_08155
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
AAA_19
AAA_22
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AKA16837
UniProt:
A0A3T0ZV95
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All DBs
Position
1775710..1777005
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AA seq
431 aa
AA seq
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MRFESFDFAPEILRAISECGYQEMTPVQQQAIPAIRRGRDVLASAQTGTGKTAAFALPIL
QRLVDNPAPVQPSNARVLILTPTRELAAQVASNINDFAKHLDITTLTIYGGGKQDVQARK
LKAGAHIIVATPGRLLEHLTACNLSLSGVECLVLDEADRILDMGFSADVQQILQAVNKTR
QNLLFSATFSEAVKKLANLMLDKPQIVSVNKQNSTADTVSHTVYPVEQKRKRELLSELIG
KQNWPQVLVFASTRESCDELVAELNLDGIKSAVVHGDKAQGSRRRALREFTEGKLRVLVA
TEVAARGLDIPDLEYVVNYDLPFLAEDYVHRIGRTGRAGKSGMAISFVSREEERTLLEIE
ALIGQKIRRIMVPGYEVSSRDELIKQLQERRRFGKRPQREDNAAAQAMAEAKLQGQRLKR
LAAAKKPRQPK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgaatcgttcgattttgcccccgagattttgcgcgccatctcagagtgcggt
tatcaggagatgacccctgtgcagcagcaggcgatcccggccatccgccgcggtcgtgac
gtgctggccagcgcccagaccggtaccggcaagaccgcagcctttgccctgcccatcctg
cagcggctggtggacaatccggcgccggtgcagccgtccaacgcccgggtgctgatcctg
accccgacccgcgagctggcggcccaggtggcgagcaacatcaatgacttcgccaagcat
ctggatatcaccaccctcaccatctacggcggtggcaagcaggatgtgcaggccagaaaa
ctgaaagcgggcgctcacatcatagtggcgaccccgggccggctgctggagcacctcacc
gcctgtaacctgagtctctccggtgtcgagtgcctggtgctggatgaagcggaccgcatc
ctcgacatgggcttcagtgccgatgtgcagcagatcctgcaggcggtcaacaagacccgt
cagaacctgctgttctccgccaccttctccgaggcggtgaagaagctggccaacctgatg
ctggacaagccccagatagtgagcgtcaacaaacagaactccactgccgataccgtcagc
cacaccgtctatccggtggagcagaagcgcaagcgcgagctgctctccgagcttatcggc
aagcagaactggccgcaggtgctggtgtttgccagtactcgcgagagctgcgacgagctg
gtagccgagctgaacctcgacggcatcaagtcggccgtggtgcacggcgacaaggcgcag
ggcagccgtcgccgcgccctgcgcgagttcaccgagggcaagctgcgggtgctggtggcc
accgaagtggccgcccgtggcctggacatcccggatctcgagtacgtggtcaactatgat
ctgccgttcctggcggaagactacgtgcaccgcatcggccgtaccggccgcgccggcaag
agcggcatggccatctccttcgtcagccgcgaagaagagcgcaccctgctggagatcgag
gcgctgatcggccagaagatccgccgcatcatggtgccgggctacgaggtgagcagccgc
gacgagctgatcaagcagttgcaggagcgtcgccgcttcggcaagcgcccgcagcgggaa
gacaacgccgccgcccaggccatggccgaggccaagctgcagggccagcgcctcaagcgc
ctggctgctgccaagaagccgcgccagccgaaataa
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