Aeromonas hydrophila J-1: V469_16800
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Entry
V469_16800 CDS
T03574
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ahj
Aeromonas hydrophila J-1
Pathway
ahj03030
DNA replication
ahj03430
Mismatch repair
ahj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V469_16800 (dnaE)
03430 Mismatch repair
V469_16800 (dnaE)
03440 Homologous recombination
V469_16800 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahj03032
]
V469_16800 (dnaE)
03400 DNA repair and recombination proteins [BR:
ahj03400
]
V469_16800 (dnaE)
Enzymes [BR:
ahj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V469_16800 (dnaE)
DNA replication proteins [BR:
ahj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V469_16800 (dnaE)
DNA repair and recombination proteins [BR:
ahj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V469_16800 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AJE37427
LinkDB
All DBs
Position
complement(3689596..3693075)
Genome browser
AA seq
1159 aa
AA seq
DB search
MAEPRFIHLRVHSDFSMVDGLQKINPIVGAAAANNMPALALTDQMNMCGLVRFYGAAHGK
GVKPIVGADFWVQSDELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDKAW
LAEHAKGVIVLSGGREGDVGKFLLKGNRQMTEQCLAFYQTHFPDAYYLELLRTGRPDEEV
YLHMAVAIATEFALPVVATNEVVFLTADDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQEEMAELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDPAVRAERRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSE
MYGREAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKRSFDLL
QRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGKEA
ISYPDEKWQHESLQPILEPTYGIILYQEQVMQIAQTLAGYTLGGADMLRRAMGKKKPEEM
AKQRAGFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIDAILEARDRDGPFRDLFDFCNRVDIKKLNKRVMEKLILSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSGELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQQIDDRFFPRLCEILEPARAGVCPVQVNYRRPGSRARLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccccgttttatccacctgcgggtccactccgacttctccatggtcgacggc
ctgcagaagatcaaccccatcgtcggcgcggcggcggccaacaacatgccggcgctggcg
ctgaccgaccagatgaacatgtgcggcctggtgcgtttctacggcgccgcccacggcaag
ggcgtcaagcccatcgtcggggccgacttctgggtgcagagtgacgagctcggcgacgag
cagttccgcctcaccctgctcgccatggacaacgacggctaccagaacatcacattgctc
atctcccgcggctatcagcgcggtcacgtgcaggggcgcccggtcatcgacaaggcctgg
ctggccgaacatgccaagggggtgatcgtgctctccggcgggcgcgagggggacgtgggc
aagttcctgctcaagggcaaccgccagatgaccgagcagtgtctggccttctatcagacc
cacttccccgatgcctattatctggagctgctgcgtaccggccgccccgatgaagaggtc
tacctgcacatggcggtggccattgccaccgagttcgcactgccggtggtggccaccaac
gaggtggtgttcctcaccgccgatgacttcgatgcccacgagatccgggtcgccatccac
gatggctacaccctgatggacaagcgccggccgcgccgctacagcccgcagcagtatctg
cgcagccaggaggagatggcggagctgtttgccgacatccccgaggcactggagaacacg
gtggagatcgccaagcgctgcaacgtgacggtgcgcctcggcgaatacttcctgcccaac
ttcccgaccggtgacatgaccaccgaagacttcctggtcatgaagtcgaaagaggggttg
gaggagcgactcgaattcctgttcccggatccggcggtgcgggccgagcgccgtcccgag
tatgacgagcggctcgacatcgagctcaaagtgatcaaccagatgggcttcccgggttac
ttcctcatcgtgatggagtttatccagtggtccaaggacaacggcatccccgttggcccg
ggccggggctcgggggcgggttctctggtggcttatgccctcaagatcaccgatctggat
ccgctggaatttgacctgctgttcgaacgtttcctgaaccccgagcgggtatccatgccc
gacttcgacgtcgacttctgcatggacagacgggacgaggtgatcgaccacgtctccgag
atgtacggccgggaagcggtatcgcagatcatcaccttcggcagcatggcggccaaggcg
gtggtacgggacgtgggccgggtgctgggccacgcctatggcttcgtcgatcgcatctcc
aagctgatcccgccggatccgggcatgacgctcgccaaggcgttcgaggccgaacccaag
ctgcccgagctctacgagcaggacgaggaggtcaaggacctcatcgacatggcgcgccgg
ctggaaggggtggtgcgcaacgccggcaaacacgccggtggcgtggtgatcgcgcccacc
aagatcaccgacttcgcaccgctctactgcgatgacgaaggccatcacccggtcacccag
ttcgacaagaacgacgtggagtacgccgggctggtgaagttcgacttcctcggcctgcgc
acgctcaccatcatcgactgggcgctcggcatgattaacccgcgccttgccaaagagggc
aagccgccggtcgacatcgccgccatccccatcgacgacaagcgctcgttcgacctgctg
cagcgctacgagaccactgcggtattccagctggaatcccgcggcatgaaggatctcatc
aagcggctgcagcctgactgcttcgaagacatgatcgcactggtggcgttgttccgcccg
ggcccgctgcagtcgggcatggtggacaacttcatcgagcgcaagcacggcaaggaggcc
atctcctatccggacgagaagtggcagcacgaaagcctgcagccgatcctcgagcccacc
tacggcatcatcctctatcaggagcaggtgatgcagattgcccagaccctggcgggttat
acgctgggcggcgcggacatgctgcgtcgggcgatgggcaagaaaaaacccgaagagatg
gccaagcaacgggccggcttcgaggagggcgcggtcaagaacggtgtcgacggcgagctg
gcgatgaagatcttcgatctggtggagaagtttgcaggctacggcttcaacaaatcccac
tctgccgcctatgcgctggtctcctaccagaccctctggctcaagacccacttcccggcg
gagttcatggcggcggtcatgaccgccgacatggacaacaccgacaagatcgtgaccctg
gtggacgagtgccagcggatggggttgaccgtgatcccgccggatgtgaacaccggtcgc
tatcgcttcagcgtcaacgaagacggtcacatcgtctacggcatcggcgcggtgaagggg
gtgggggaaggccccatcgatgcgatcctggaagcgcgggatcgggacgggccgttccgc
gatctgttcgacttctgcaatcgggtcgacatcaagaagctcaacaagcgggtgatggag
aagctcattctctccggcgccatggatcggctcggcccccaccgcgccgccctgatggcg
accctggaggaggcgatgcgcgccgccgagcagcacgccaaggcgcaggcggtgggtcag
gtcgacatgttcggcgtgctcaccgaagagatagacgacgtcaagaaggcgttcgccaac
gtgccgcactggcctgacaaggtgtggctggaaggggagcgcgagaccctcgggctttac
ctcaccggtcaccccatcaaccagtacagcggcgagctgcgtcgttatacctcgggccgg
ctgtgcgatctgcaccccacctcccgcgataccgtcaccacggccgccggcttggtgatt
gcggcgcgcagcatggtgaccaagcgtggcaacaagatggggatcttcaccctggacgac
cgttccggtcgcctcgatgtgaccctgttcagtgaagcgctggaaaagtatgaagaattg
atgcaaaaagaccgtattttggtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgtgaattactggatatcaacgatgcgagagagcgttttgcc
agggcgatccgcatctctctcgatgaacagcagattgatgatcgttttttcccgcgtttg
tgcgagattttggaacccgcccgtgccggagtttgtccggttcaggtaaactatcgtcgc
cccggttcccgggcacgattgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgcgtcctgcttggacgagagcgggttgaattggtttttgattag
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