KEGG   Acidianus hospitalis: Ahos_0613Help
Entry
Ahos_0613         CDS       T01493                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
aho  Acidianus hospitalis
Pathway
aho03030  DNA replication
aho03410  Base excision repair
aho03420  Nucleotide excision repair
aho03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Ahos_0613
   03410 Base excision repair
    Ahos_0613
   03420 Nucleotide excision repair
    Ahos_0613
   03430 Mismatch repair
    Ahos_0613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aho03032]
    Ahos_0613
   03400 DNA repair and recombination proteins [BR:aho03400]
    Ahos_0613
Enzymes [BR:aho01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Ahos_0613
    6.5.1.6  DNA ligase (ATP or NAD+)
     Ahos_0613
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Ahos_0613
DNA replication proteins [BR:aho03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Ahos_0613
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Ahos_0613
DNA repair and recombination proteins [BR:aho03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Ahos_0613
   NER (nucleotide excision repair)
    Other NER factors
     Ahos_0613
   MMR (mismatch exicision repair)
    Other MMR factors
     Ahos_0613
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID: AEE93501
UniProt: F4B718
LinkDB All DBs
Position
582996..584798
Genome map
AA seq 600 aa AA seqDB search
MEFKIIAEYFDRLEKISSRLQLTSLLADLFKKTDKNVIDKVVYLIQGKLWPDFLGMPELG
IGEKFLIRALSIATSVSDDEIEKMYKSVGDLGQVAFDIKQKQQSASILAFLGAQKASKPL
TVEKVYDDLTKVATSTGEGSRDIKIRLLAGLLKDASPLEAKYLVRFVDGRLRVGIGDATI
LDALAITFGGGQNFRPIVERAYNLRADLGNIAKILANGGIEQLKNIKPQPGIPIRPMLAE
RLSDPAEMLSKVGNLALVDYKYDGERGQIHKAGDKIFIFSRRLENITNQYPDVAEYISKY
VKGNEFIVEGEIIPVDPETGEMRPFQELMHRKRKSDIHEAIKEYPVNVFLFDLMYYEGED
YTVKPLSERRKKLESIVEDNDYVHIATHIITDNVEKLKEFFYQAISEGAEGVMVKSLAPD
AIYQAGSRGWLWIKFKRDYQSEMADTVDLVMVGAFHGKGRKGGKYSSFLMAAYNPDKDVF
ETVCKVASGFTDAELDDLQKKIAELKRDSPHPRVVSTMVPDVWLTPALVAEIIGAEITIS
PLHTCCKDQYAEGGLSIRFPRFIRWRPDKSPEDATTNREILEMYKSQLKKIEEKPSDQNV
NT seq 1803 nt NT seq  +upstreamnt  +downstreamnt
atggagtttaaaattatagctgaatactttgatagactagaaaagatctcttctaggctt
caacttacatcattactagcggatctttttaagaaaactgataaaaatgttattgataaa
gttgtatatttaattcaaggtaaactatggccagacttcttaggaatgccagaattagga
ataggtgaaaaattccttataagagcattatcaatagctacgagtgtaagcgatgatgaa
atagaaaaaatgtataaatcggtaggagatctaggacaagtagcttttgatataaaacaa
aaacaacaatctgcaagcattttagcgtttttaggagcacaaaaggcttcaaaaccactg
actgtagaaaaagtttatgatgacttaacaaaagttgctacaagcactggagaaggtagt
agagatattaaaatcagattattagcaggattacttaaggatgcttctccacttgaagct
aaatatttagttagatttgttgacggtaggttaagagtcggaataggagacgctacaata
ttagacgcactagcaataactttcggtggcgggcagaactttaggcctatagtcgaaaga
gcatacaatttaagggctgatttaggtaatattgcaaaaatattagcaaatggtggaatt
gagcaactgaagaacattaaacctcaaccagggattccaataaggccaatgctagccgaa
agattatcagaccctgcagagatgttaagtaaagtaggcaatcttgcattggttgattac
aagtatgatggagagagaggacagattcataaagcaggagataaaattttcatattctct
agaagattagaaaatataacaaatcaatatcctgacgtagcagagtatatttcaaaatac
gttaaaggcaatgagttcatagttgaaggagaaataataccagtagacccggaaactggc
gaaatgagacctttccaagaattgatgcataggaaaaggaagtctgacattcacgaggct
ataaaagagtacccagttaacgtattcttgtttgatttaatgtactatgaaggagaagat
tatacagtaaagccgttatcagaaagacgtaagaagttagaatcaattgttgaagataac
gattatgtgcatatagctactcatatcataactgataatgtagaaaaactaaaggaattc
ttctatcaagcaatctctgaaggcgcagaaggcgtgatggtaaaatctctggcaccagat
gcaatatatcaagcaggatcaagaggttggctttggataaagtttaagagagattaccag
agcgaaatggcagatactgtagacctggtaatggtaggagctttccacggtaaaggaagg
aaaggaggcaagtatagttccttcttaatggctgcatataacccagacaaggacgttttc
gagactgtatgtaaggttgcttctggttttactgacgcagagcttgacgatttacagaag
aaaattgcagagttaaaaagagattcccctcacccaagagttgtttcaactatggttccg
gacgtttggttgactccggctcttgttgctgagataattggggctgaaataactatatct
cctttacatacgtgctgtaaagatcaatatgcagaaggtggtttatcaataagatttcca
agatttataaggtggaggccagataagagcccagaagacgcaactactaatcgtgaaatt
cttgagatgtataagagccaattaaagaagatcgaagaaaagccgtcagatcaaaatgta
taa

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