Aeromonas hydrophila pc104A: V429_05755
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Entry
V429_05755 CDS
T03193
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ahp
Aeromonas hydrophila pc104A
Pathway
ahp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V429_05755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahp03000
]
V429_05755
03400 DNA repair and recombination proteins [BR:
ahp03400
]
V429_05755
Enzymes [BR:
ahp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
V429_05755
Transcription factors [BR:
ahp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
V429_05755
DNA repair and recombination proteins [BR:
ahp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V429_05755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_Tnp_ISL3
HHH
Xre-like-HTH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AHX68396
LinkDB
All DBs
Position
complement(1214209..1215786)
Genome browser
AA seq
525 aa
AA seq
DB search
MPTDHAMTMPPATEHEPGLPLSAEQCHAARLARDARFDGRFFTGVLSTGIYCRPVCPARP
PHEHNVRYFQSAAAAEQHGLRPCLRCRPELAPAAPGDLPPTLARLLARIDRGELAEGSLT
TLAEQAGISERTLRRQFEQHLGASPKQVEQTRRLLLAKRLLTETRLPITDIAFAAGFASI
RRFNDAWQQAYGLAPRALRRQSEPAGGALTQAAPQPEEGAMLTLQLPYRPPYDVAAMLAF
YRLRAIPGLERVDGEVYERWHRVGDQLARVRISQGKGHSLQLSVHDLPPAALPDLLYRVR
RMWDLDTDMQRIGTRLGQDPLLARLLARWPGVRLPAGWDEYEVMLRAIVGQQVSVKGAIT
ILGRLVARTEAQFGVAQLPTPAQLCELNLDGIGMPGSRIKTLQGLAQALASGELSLLSAS
DEQLLALPGIGPWTVAYWRLRCGLDPDAFPASDLVLLKALGGGTKLPVKAVLAHSERWRP
WRGYAASWLWHAMSEEPALLTESALLTKPTPGRAASDNQAEETTP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagatcacgccatgacgatgccgccggccacagagcatgagccaggcctgccg
ctcagcgccgagcagtgccatgccgcccgcctggcccgcgatgcgcgcttcgacggccgc
ttctttaccggcgtgctctccaccggcatctactgccggcctgtttgtccggcgcggccg
ccacacgagcacaacgtgcgctacttccaaagcgccgccgcagccgagcaacacggcctg
cgcccctgcctgcgctgccggcctgagctcgcgcccgccgcccccggcgatctgccaccg
acgctggcgcgcctgctggcccggatcgatcgcggcgaactggcggaaggctcgctcacc
acgctggcggaacaggccggcatcagtgagcgcacgctgcgccgccagtttgagcaacac
ctcggcgcctcgccgaaacaggtggagcagacgcgccggctgctgcttgccaagcggctg
ttgaccgaaacccggctgcccatcaccgacatcgcgtttgcggcgggctttgccagcatt
cgccgcttcaatgacgcctggcagcaggcatacgggctggcaccgcgggccctgcgccgt
cagagcgagccagccggcggcgccctgacgcaggctgcgccgcagcccgaggagggggcg
atgctcacgctgcaactgccctaccgccccccgtacgacgtggcggccatgctggcgttc
taccggctgcgcgccattccggggctggagcgggtggatggcgaggtctatgaacgctgg
caccgggtcggcgatcagctcgcgcgggtgcgcatcagccagggcaaggggcacagcctg
cagctcagtgtccatgatctgccgcccgccgcgctgccggatctgctgtatcgggtgcgc
cggatgtgggatctcgataccgacatgcagcgcatcggtacgcggctcgggcaggatccg
ctgctggcgcgcctgctggcgcgctggccgggggttaggctgcccgccggctgggatgag
tacgaggtgatgctgcgcgccatcgtcggccagcaggtgtcggtcaagggggccatcacc
atactcgggcggctggtggcgcgcaccgaggcgcaattcggggtggcgcagttgcccacc
cctgcccagctgtgcgagctcaatctggacggtatcggcatgcccggcagccggatcaaa
acgctgcaggggctggcacaggcgctggccagcggcgagttgagcttgctcagcgccagc
gatgaacagctgctggcgctgcccggtatcggcccctggacggtcgcctactggcggctg
cgctgcgggttggatccggatgccttccccgcctcggatctggtgctactgaaggcgctg
gggggcggcaccaagctgccagtgaaagcggtattggcccacagcgaaaggtggcggccc
tggcgcggctacgcggcgagctggctgtggcatgccatgagcgaggagccggcactgttg
accgaatcggcactgctgaccaagccgacaccaggccgcgcagcaagcgacaaccaagca
gaggagacaaccccatga
DBGET
integrated database retrieval system
