Aeromonas hydrophila pc104A: V429_18340
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Entry
V429_18340 CDS
T03193
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ahp
Aeromonas hydrophila pc104A
Brite
KEGG Orthology (KO) [BR:
ahp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahp03016
]
V429_18340 (truB)
Enzymes [BR:
ahp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V429_18340 (truB)
Transfer RNA biogenesis [BR:
ahp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V429_18340 (truB)
Prokaryotic type
V429_18340 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHX70724
LinkDB
All DBs
Position
complement(4009549..4010508)
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AA seq
319 aa
AA seq
DB search
MSRRRRFKGRDVHGILLLDKPTGLTSNDVLQKVKRIYNAAKAGHTGALDPLATGMLPICL
GEATKFSQYLLEADKRYEVTAKLGERTNTSDSDGEVVSTRPVNVAVGTLIESLDQFRGPI
MQVPSMYSALKHNGRPLYEYAREGIEIEREARPITVFELKLISFEGDEVKLEVHCSKGTY
IRSLVDDLGEVLGCGAHVTQLRRTQVASYPYERMLTLEQLECIFEQAKAESIPPREQLDP
LLLPMDTAVASLPEVNMLAAVAAYVNQGQAVQVAGAPQSGQVRMTVGPEREFIGVGEIDD
EGRVAPKRLVRYHDEHDEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtagacgtcgtttcaagggccgtgacgtgcacggtatcctgctgctggacaag
ccgaccgggctgacctccaacgatgtgttgcagaaggtcaagcggatctacaacgccgcc
aaggccggccacaccggtgccctggacccgctggcaaccggcatgctgccgatctgcctc
ggcgaagccaccaagttctcccagtatctgctggaagcggacaagcgctacgaagtgacc
gccaagctgggcgagcgcaccaataccagcgactccgatggcgaggtagtctccacccga
ccggtgaacgtggccgtgggtactctgatcgagtcgctggaccagttccgcggccccatc
atgcaggtgccgtccatgtactccgccctcaagcacaacggtcgcccgctctacgagtac
gcccgtgaaggcatcgagatcgagcgggaagcccgccccatcacggtgttcgagctcaag
ctcatcagctttgaaggggacgaggtcaagctggaggtgcactgcagcaagggtacctac
atccgctccctggtggacgatctgggggaggtgctgggctgtggcgctcacgtcacccag
ttgcgccgtacccaggtggccagctatccctatgagcggatgctgaccctggaacagctc
gagtgcatcttcgagcaggccaaggccgaaagcattccgccgcgcgagcagctggatccg
ctgctgctgccgatggacaccgccgtggcaagcctgcccgaggtgaacatgctggccgcc
gtggccgcctatgtgaaccagggccaggccgtgcaggtcgccggagcgccgcaaagcggt
caggtgcgcatgacggtcggtccggagcgcgagttcatcggcgtgggcgagatcgacgac
gaggggcgcgtggcgcccaagcgtctggtgcgttatcacgacgaacacgacgaggagtga
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