KEGG   Aeromonas hydrophila pc104A: V429_21950
Entry
V429_21950        CDS       T03193                                 

Definition
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
ahp  Aeromonas hydrophila pc104A
Pathway
ahp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    V429_21950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ahp03400]
    V429_21950
Enzymes [BR:ahp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     V429_21950
DNA repair and recombination proteins [BR:ahp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     V429_21950
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_11 Biotin_carb_C
Other DBs
NCBI-ProteinID: AHX71372
LinkDB
Position
complement(4724352..4727957)
AA seq 1201 aa
MANPLNTLRFPLYGERLIEASAGTGKTYTIAGLYLRLLLGHGPLIEEGEDAGQPSAHERP
LSVTEILVVTFTEAATAELRGRIRARIHEARLAFMRGESKDALLSQLLVEVEDHELAARR
LLAAERQMDEAAVFTIHGFCQRMLKQNAFESGALFETEFLTDDSQLRLQAVSDYWRSEFY
PVDKPLASAVRALWPSPAALLREMGSWLDNSELEMRPPAGDETLAARHQAAMARIEAVKR
EWLAQGDEIRRQTDGQVSRYTGKNYEGWLAKIADWAQDEASGYAIPKELERFGQTVLEEN
LKKGGAVPTLPLFSQIDALLASRPGIRDLILQRAAVVVRSRMQASKRQAHQLSFDDLLKD
LDGALCSGLGERLCERIRATYRVAMIDEFQDTDPQQYRIFHRLYGGHTDTALLMIGDPKQ
AIYGFRGADIFTYIQARRNVSAHYTLGRNWRSSRALVAAVNGLFERAKDPFIYEADIPFL
PVEAQGKSKALQLDGEVAPVLHCWQLSGQPTFNKGDYQSRMARATAVEIHRLLTLARAGK
AQIGDQPVKAGDIAVLVRTGAEGKLVQQELARLAIASVYLSNRESVLEQTEAREILLILH
ACQNPSEERSLRAALATGLFDLDAKALDGLASDERAWESAVQEFLEYRKIWHRRGVLAML
RALLHRRNLASSLLASPYGERRLTNFLHLGELLQQVSSELDGEYALLRWLGEAVSRPNGQ
DAEQVLRLESERKLVQIVTIHKSKGLEYPLVFLPFICSHRTAETPLYHESDETGNHTILD
LTGAEGSLAEADRERLAEDLRLLYVALTRGVYATWLGLAPVRAGAGKSEKTDLHHTAIGY
LLQKGEEGDAQTLATALTELAQALPGVAVGEPSLTRPAPLPPEEEQLGEPQVRHFSGTLE
RDWWISSYSGLAAQGHGHSKGVLANPGFDDEVVTEAAALASEQAEEAPQPSIFTFPKGAR
PGTLLHSLFETIDFQRAEGEPLAEHIATLLAQDGFDESWAQVLQQQVEAVLDTPLETGFG
EPVRLRDLAPERKQVELEFFLPMGRVTAPALTAICQQHDPLSRGNKPLSFATVQGMLKGF
IDLVFEWQGRWYLLDYKSNHLGMSPADYSRPALEQAMAEHRYDLQYQLYSLALHRLLTLR
LPGYDFEQHFGGVFYLFLRGMPQGGIFHTRPSRELVLGLDRLFGEGAAPALAGVSDNGVE
A
NT seq 3606 nt   +upstreamnt  +downstreamnt
atggccaacccgctcaataccctgcgttttcccctctatggcgagcgactgatcgaggcc
tctgccggcaccggcaagacctacaccatcgccggtctctacctgcgcctgctgctgggc
catggcccgctcattgaagagggggaagacgccggtcaacccagcgcccacgagcgcccg
ctctcggtgaccgagatcctggtggtgacctttaccgaggcggctaccgccgagctgcgc
gggcggatccgcgcccgcatccacgaggcacggctcgcctttatgcgcggtgaaagcaag
gacgccctgctgagccagctgctggtggaggtggaggatcacgaactggcggcccgccgc
ctgctggccgccgaacggcagatggacgaggcggcggtcttcaccatccacggcttctgc
cagcggatgctgaaacagaacgccttcgagtcgggcgccctctttgaaaccgaatttctc
accgacgacagccagctcaggctgcaggcggtgagcgactactggcgatccgagttctat
ccggtggacaagcccctcgccagcgccgtgcgtgcgctctggccgagccccgccgccctg
ttgcgggagatgggcagctggctcgacaacagcgagctggagatgcgcccgcctgcgggg
gacgagaccctcgccgcccgccatcaggcagccatggcccgcattgaggcggtgaagcgc
gaatggctggcgcaaggggacgagatccgccgccagacggatgggcaagtaagccgctac
accggcaagaactacgaaggctggcttgccaagatagccgactgggcgcaggacgaggcc
agcggctacgccatccccaaggagctggagcgcttcggccagacggtgctggaggagaac
ctcaagaaggggggcgcggtgccgaccctgccgctgttcagccagattgatgcgttgctg
gcgagccgtcccggcattcgcgatttgatcctgcaacgggcggcggtggtggtacgcagc
cggatgcaggccagcaagcgccaggctcatcagctctcgttcgatgacctgctcaaagac
ctcgacggcgcgctttgctccggtcttggcgagcggctatgcgagcgcattcgcgccacc
taccgggtggcgatgatcgatgaatttcaggataccgacccccagcagtaccgcatcttc
caccggctttacggcggccacaccgacacggcgctgctgatgatcggtgaccccaagcag
gccatctacggctttcgcggcgccgacatctttacctacattcaggcgcggcgaaatgtg
agcgcccactacaccctcgggcgcaactggcgctccagccgcgcgctggtggcggcggtc
aacggcctgttcgagcgggccaaggatccctttatctacgaggcggatatccccttcctg
ccggtggaggcgcagggcaagagcaaggcgctgcagctggatggcgaagtcgcccccgtg
ctccactgctggcagctgagcggccaacccaccttcaacaagggggattaccagagccgg
atggcccgcgccacggcggtggagatccaccgcctgctgactctggcccgcgcgggcaag
gcgcagatcggcgaccagccggtgaaagcgggggatatcgccgtgctggtgcgcaccggc
gccgagggcaagctggtgcagcaggagctggcgcgcctcgccatcgcctccgtctatctg
tcgaaccgcgagagcgtgctggagcagacggaggcgcgggagatcctgttgattttgcac
gcctgtcagaacccgagcgaggagcgcagcctgcgggcggcgctggcgaccggcctgttt
gatctcgacgccaaggcgctcgatgggctggccagcgacgagcgggcgtgggagagcgcg
gtgcaggagtttctggagtaccgcaagatctggcaccgccgtggcgtgctggccatgctg
cgggccctgctgcaccggcgcaatctcgcctcttcgcttttggcgagcccctatggcgag
cggcggctgaccaacttcctccatcttggcgagctgctgcaacaggtgagcagcgagctg
gatggggagtatgccctgctgcgctggctgggggaggcggtgagtcgccccaacgggcag
gatgcggagcaggtactgcgcctcgaatccgagcgcaagctggtgcagatagtcaccatc
cacaaatccaaggggctggagtacccactggtgttcctgccctttatctgcagccacaga
accgccgagaccccgctctatcacgagtcggatgagacgggcaatcacaccattctcgat
ctgaccggcgccgagggctccctggcggaggccgaccgcgagcgccttgccgaagatttg
cggctgctctatgtggcgctgacccggggcgtctacgccacctggctggggctggcgccg
gtgcgggcgggtgcgggcaagtcggagaagaccgacctgcaccacaccgccatcggctac
ctgctgcaaaagggtgaagagggggatgcgcagacgctggcgaccgccttgaccgagctg
gcacaggcgctgcccggggtggccgtcggtgagccctcgctcacccgtccggccccgctg
ccgccagaggaggagcagttgggcgagccgcaggtgcgccactttagcggcacccttgag
cgggactggtggatcagctcctactccgggctggcggcgcaggggcacggtcacagcaag
ggcgtactcgccaatcccggcttcgatgacgaggtagtgaccgaggcggctgcattggct
tccgagcaagcggaggaggcgccccagccctccatcttcaccttcccgaaaggggcgcgc
cccggcaccttgctgcacagcctgttcgagaccatcgactttcaaagagccgagggcgag
ccgctggcagagcatatcgccaccctgctggcgcaagatggcttcgacgagagctgggcc
caagtgctgcaacagcaggtggaggcggtgctcgataccccgctggaaaccggctttggc
gagccggtacggctgcgggatctggcccccgagcgcaaacaggtggagctggagttcttt
ctgcccatggggcgggtgacggcgccggcgctgaccgcgatctgccagcagcatgacccg
ctgtcgcggggcaacaaaccgctcagctttgccaccgtgcaggggatgctcaagggtttt
atcgacctggtgttcgagtggcaggggcgctggtatctgctcgactacaaatccaaccac
ctcggcatgagcccggccgattacagccgtccggcgctggagcaggcgatggccgagcac
cgctacgacctgcaataccagctctactcgctggcgctgcaccggctgctcaccttgcgc
ctgccgggttacgacttcgagcagcactttggcggcgtcttctatctgtttctgcgcggc
atgccgcaggggggcattttccatacccgccccagccgtgaactggtgctggggctggat
cggttgtttggcgagggggcggcgcccgccctcgccggggtatcggataacggggtagaa
gcatga

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